RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TRAV8-3A0A0A6YYJ7 113 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 KNCNA6PVL3 124 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 SCO1O75880 301 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 PPYP01298 95 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 IGKV1-39P01597 117 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 SMR3BP02814 79 aaPredicted RBP3.24□□□□□ -1.89
CKS1B-204ENST00000471245 IGKV1D-39P04432 117 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 TYMSP04818 313 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 MSMO1Q15800 293 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 Q56UQ5 140 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 OR1L8Q8NGR8 309 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 OR5H6Q8NGV6 325 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 ASB13Q8WXK3 278 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 COMMD5Q9GZQ3 224 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 CYTL1Q9NRR1 136 aa3.24□□□□□ -1.89
CKS1B-204ENST00000471245 TRDV1A0A1B0GX56 115 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 H3BP45 60 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 MT-CO2P00403 227 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 IL4P05112 153 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 PSMA1P25786 263 aaKnown RBP3.23□□□□□ -1.89
CKS1B-204ENST00000471245 G6PCP35575 357 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 LPAR6P43657 344 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 AQP4P55087 323 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 FXYD4P59646 89 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 AP3S2P59780 193 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 DEFB1P60022 68 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 OR1P1Q8NH06 330 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 DTD1Q8TEA8 209 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 DCANP1Q8TF63 244 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 LSM10Q969L4 123 aaKnown RBP3.23□□□□□ -1.89
CKS1B-204ENST00000471245 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 FXYD6Q9H0Q3 95 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 C8orf4Q9NR00 106 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 NDUFB11Q9NX14 153 aa3.23□□□□□ -1.89
CKS1B-204ENST00000471245 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 MEIS3P1A6NDR6 274 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 C9JQL5 133 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 PDCD5O14737 125 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 PGLYRP1O75594 196 aaPredicted RBP3.22□□□□□ -1.89
CKS1B-204ENST00000471245 KRASP01116 189 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 HTN3P15516 51 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 RCVRNP35243 200 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 FUSP35637 526 aaKnown RBP eCLIP3.22□□□□□ -1.89
CKS1B-204ENST00000471245 AP2S1P53680 142 aaPredicted RBP3.22□□□□□ -1.89
CKS1B-204ENST00000471245 GNG2P59768 71 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 MOBPQ13875 183 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 SPINK9Q5DT21 86 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 UBE2NLQ5JXB2 153 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 GDF5OSQ5U4N7 250 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 AADACL3Q5VUY0 350 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 ORMDL3Q8N138 153 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 SLC35G3Q8N808 338 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 YPEL4Q96NS1 127 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 TMEM208Q9BTX3 173 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 MRPS26Q9BYN8 205 aaKnown RBP3.22□□□□□ -1.89
CKS1B-204ENST00000471245 MAP1LC3AQ9H492 121 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 SCN3BQ9NY72 215 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
CKS1B-204ENST00000471245 COLCA2A8K830 154 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 IGKV1-17P01599 117 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 CRYBB3P26998 211 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 EMP1P54849 157 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 ARPC4P59998 168 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 CATR1Q13166 79 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 SFXN4Q6P4A7 337 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF705AQ6ZN79 300 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-204ENST00000471245 C15orf53Q8NAA6 179 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 OR5H2Q8NGV7 314 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 CCDC90BQ9GZT6 254 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 TXNL4BQ9NX01 149 aaKnown RBP3.21□□□□□ -1.9
CKS1B-204ENST00000471245 RABAC1Q9UI14 185 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 PRO0461Q9UI25 63 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 TPRKBQ9Y3C4 175 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 LINC00588Q9Y4M8 146 aa3.21□□□□□ -1.9
CKS1B-204ENST00000471245 TMEM189A5PLL7 270 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF705FA8MVS1 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 A8MWL6 223 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 H3BMM0 161 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 GNG7O60262 68 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 SNAPC5O75971 98 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 IGKV1-5P01602 117 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 PMP2P02689 132 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 PRM2P04554 102 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 CD5P06127 495 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF705DP0CH99 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF705BP0CI00 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 RNASE2P10153 161 aaKnown RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 SDC2P34741 201 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 TGFBR1P36897 503 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 FXYD7P58549 80 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 PSMG4Q5JS54 123 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms