RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 PKD1L2Q7Z442 2459 aa8.71□□□□□ -1.01
SRGAP3-204ENST00000470951 ROS1P08922 2347 aa8.71□□□□□ -1.01
SRGAP3-204ENST00000470951 HOXA3O43365 443 aaPredicted RBP8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 DYNAPQ8N1N2 210 aa8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 PIEZO2Q9H5I5 2752 aa8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 EPG5Q9HCE0 2579 aa8.71□□□□□ -1.02
SRGAP3-204ENST00000470951 PRRG2O14669 202 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 CTSGP08311 255 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 LYRM7Q5U5X0 104 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 OR11H6Q8NGC7 330 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 S4R3C0 116 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 USP24Q9UPU5 2620 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 A0A0G2JNJ9 132 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 C9JAW5 83 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 SNCGO76070 127 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 DLX4Q92988 240 aaPredicted RBP8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 TMEM101Q96IK0 257 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 Q9UFV3 132 aa8.7□□□□□ -1.02
SRGAP3-204ENST00000470951 PKDREJQ9NTG1 2253 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 LY6G5BQ8NDX9 201 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 E7EQL1 145 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 HLA-DMBP28068 263 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 PRB3Q04118 309 aaPredicted RBP8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 SBSPONQ8IVN8 264 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
SRGAP3-204ENST00000470951 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 TRGV3P03979 118 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 ERCC8Q13216 396 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 TOMM6Q96B49 74 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 LGALS1P09382 135 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 IGFL4Q6B9Z1 124 aa8.68□□□□□ -1.02
SRGAP3-204ENST00000470951 EFNA4P52798 201 aa8.67□□□□□ -1.02
SRGAP3-204ENST00000470951 NEXN-AS1Q8NBZ9 246 aa8.67□□□□□ -1.02
SRGAP3-204ENST00000470951 CACNA1BQ00975 2339 aa8.67□□□□□ -1.02
SRGAP3-204ENST00000470951 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 RS1O15537 224 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 BUB3O43684 328 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 UBE2D1P51668 147 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 HES1Q14469 280 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 AGPAT4-IT1Q9H0P7 198 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 ODF3BA8MYP8 253 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 NPFFO15130 113 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 CRLF1O75462 422 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 BAALCQ8WXS3 180 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 ATRXP46100 2492 aa8.66□□□□□ -1.02
SRGAP3-204ENST00000470951 OOSP1A8MZH6 123 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 K7ENP7 123 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 M0R1W7 72 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 UBE2D3P61077 147 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 UBE2D2P62837 147 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 STHQ8IWL8 128 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 RP1L1Q8IWN7 2480 aaPredicted RBP8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 SPENQ96T58 3664 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-204ENST00000470951 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 LINC01549A6NIU2 74 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 NDPQ00604 133 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 TMEM219Q86XT9 240 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 ZFAND3Q9H8U3 227 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.03
SRGAP3-204ENST00000470951 GHRHP01286 108 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 Q8N6K4 173 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 M0R381 172 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 PPP1R17O96001 155 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 EBI3Q14213 229 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 RNF182Q8N6D2 247 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 ZFYVE26Q68DK2 2539 aa8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 SMG1Q96Q15 3661 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-204ENST00000470951 BSNQ9UPA5 3926 aa8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 ZNF815PA8K554 130 aa8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 NDUFA7O95182 113 aa8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 COX6B1P14854 86 aa8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms