RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 A8MWL6 223 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 LINC01587Q99440 93 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 NEU1Q99519 415 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 TMEM208Q9BTX3 173 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 IL36BQ9NZH7 164 aa12.71□□□□□ -0.37
RPL39-202ENST00000468844 GNRH2O43555 120 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 HTN1P15515 57 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 TCL1AP56279 114 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 ZNF705AQ6ZN79 300 aaPredicted RBP12.7□□□□□ -0.38
RPL39-202ENST00000468844 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 TRAPPC1Q9Y5R8 145 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 SMIM27A0A1W2PRY6 76 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 JOSD1Q15040 202 aaPredicted RBP12.7□□□□□ -0.38
RPL39-202ENST00000468844 DEFB135Q30KP9 77 aa12.7□□□□□ -0.38
RPL39-202ENST00000468844 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
RPL39-202ENST00000468844 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
RPL39-202ENST00000468844 RPS20P60866 119 aaKnown RBP12.69□□□□□ -0.38
RPL39-202ENST00000468844 GFRA4Q9GZZ7 299 aa12.69□□□□□ -0.38
RPL39-202ENST00000468844 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
RPL39-202ENST00000468844 TRAV9-1A0A075B6T8 112 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 CBY3A6NI87 242 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
RPL39-202ENST00000468844 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
RPL39-202ENST00000468844 FOXA3P55318 350 aaPredicted RBP12.67□□□□□ -0.38
RPL39-202ENST00000468844 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
RPL39-202ENST00000468844 H3BVH4 76 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 Q6ZWC4 215 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 MDFICQ9P1T7 246 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 IGHV3-16A0A0C4DH30 117 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 AZU1P20160 251 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 ASIPP42127 132 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 PKIAP61925 76 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
RPL39-202ENST00000468844 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
RPL39-202ENST00000468844 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
RPL39-202ENST00000468844 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
RPL39-202ENST00000468844 TRGV11A0A075B6L2 103 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 ARMS2P0C7Q2 107 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 DEFB121Q5J5C9 76 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 C11orf72Q8NBR9 251 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 PGLYRP4Q96LB8 373 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 RCHY1Q96PM5 261 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 X6R8D5 127 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 STAB2Q8WWQ8 2551 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 SPRY2O43597 315 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 SNAI2O43623 268 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 SPINK4O60575 86 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 CTRLP40313 264 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 RNASE8Q8TDE3 154 aaKnown RBP12.64□□□□□ -0.39
RPL39-202ENST00000468844 RNF183Q96D59 192 aa12.64□□□□□ -0.39
RPL39-202ENST00000468844 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
RPL39-202ENST00000468844 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
RPL39-202ENST00000468844 OR5AL1P0C617 328 aa12.63□□□□□ -0.39
RPL39-202ENST00000468844 DEFA6Q01524 100 aa12.63□□□□□ -0.39
RPL39-202ENST00000468844 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
RPL39-202ENST00000468844 SCRT2Q9NQ03 307 aa12.63□□□□□ -0.39
RPL39-202ENST00000468844 TIMM8BQ9Y5J9 83 aaPredicted RBP12.63□□□□□ -0.39
RPL39-202ENST00000468844 TSTD3H0UI37 97 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 SBSPONQ8IVN8 264 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
RPL39-202ENST00000468844 SSTP61278 116 aa12.61□□□□□ -0.39
RPL39-202ENST00000468844 OR11H2Q8NH07 326 aa12.61□□□□□ -0.39
RPL39-202ENST00000468844 PLAC8L1A1L4L8 177 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 F2Z2F3 143 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 DDTP30046 118 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
RPL39-202ENST00000468844 PRO1933Q9H354 126 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 A0A1B0GUT8 65 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 MRAPQ8TCY5 172 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 OVOL2Q9BRP0 275 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
RPL39-202ENST00000468844 RETNQ9HD89 108 aa12.6□□□□□ -0.39
RPL39-202ENST00000468844 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
RPL39-202ENST00000468844 TP53TG1Q9Y2A0 90 aa12.59□□□□□ -0.39
RPL39-202ENST00000468844 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.39
RPL39-202ENST00000468844 NUPR1O60356 82 aa12.58□□□□□ -0.39
RPL39-202ENST00000468844 NTF3P20783 257 aa12.58□□□□□ -0.39
RPL39-202ENST00000468844 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.39
RPL39-202ENST00000468844 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.39
RPL39-202ENST00000468844 M0R381 172 aa12.58□□□□□ -0.4
RPL39-202ENST00000468844 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
RPL39-202ENST00000468844 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
RPL39-202ENST00000468844 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
RPL39-202ENST00000468844 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms