RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DEFB130BP0DP73 79 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 DEFB130AP0DP74 79 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 C12orf74Q32Q52 190 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 C10orf91Q5T1B1 145 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
SNIP1-202ENST00000468040 CARHSP1Q9Y2V2 147 aaKnown RBP10.83□□□□□ -0.68
SNIP1-202ENST00000468040 PHLDA3Q9Y5J5 127 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 TRGV2A0A075B6R0 118 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 F2Z2F3 143 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 SNAI2O43623 268 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GAGE7O76087 117 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 GZMBP10144 247 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
SNIP1-202ENST00000468040 ZNF876PQ49A33 203 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 SLC7A5P1Q8MH63 180 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 SYT8Q8NBV8 401 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
SNIP1-202ENST00000468040 V9GYV3 84 aa10.82□□□□□ -0.68
SNIP1-202ENST00000468040 MT-ND4LP03901 98 aa10.81□□□□□ -0.68
SNIP1-202ENST00000468040 ZFP82Q8N141 532 aa10.81□□□□□ -0.68
SNIP1-202ENST00000468040 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
SNIP1-202ENST00000468040 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
SNIP1-202ENST00000468040 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
SNIP1-202ENST00000468040 FAM231BA6NCW3 169 aa10.8□□□□□ -0.68
SNIP1-202ENST00000468040 Q6ZTC4 211 aa10.8□□□□□ -0.68
SNIP1-202ENST00000468040 ANAPC16Q96DE5 110 aa10.8□□□□□ -0.68
SNIP1-202ENST00000468040 M0R381 172 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 NXPH4O95158 308 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 CTRLP40313 264 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 CACNG7P62955 275 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 RNF212Q495C1 297 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 SPANXN1Q5VSR9 72 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 OR10AG1Q8NH19 301 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 GTSF1Q8WW33 167 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 STAB2Q8WWQ8 2551 aa10.79□□□□□ -0.68
SNIP1-202ENST00000468040 A8MWV9 139 aa10.78□□□□□ -0.68
SNIP1-202ENST00000468040 ATP5G1P05496 136 aa10.78□□□□□ -0.68
SNIP1-202ENST00000468040 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
SNIP1-202ENST00000468040 DMRTA1Q5VZB9 504 aa10.78□□□□□ -0.68
SNIP1-202ENST00000468040 LYZL1Q6UWQ5 148 aa10.78□□□□□ -0.68
SNIP1-202ENST00000468040 TRAV10A0A0B4J240 114 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 TRAV4A0A0B4J268 109 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 SVBPQ8N300 66 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 OR4C5Q8NGB2 326 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 MUC4Q99102 2169 aa10.77□□□□□ -0.69
SNIP1-202ENST00000468040 IGHV4-4A0A075B6R2 117 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 CIDEAO60543 219 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 APOC3P02656 99 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 HTN3P15516 51 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 RHEBQ15382 184 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 CLRN3Q8NCR9 226 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
SNIP1-202ENST00000468040 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
SNIP1-202ENST00000468040 TGP01266 2768 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 NUPR2A6NF83 97 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 RS1O15537 224 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
SNIP1-202ENST00000468040 F5H768 121 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 RHODO00212 210 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 SNAPINO95295 136 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 IGHV3-53P01767 116 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 SSTP61278 116 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 AP1S3Q96PC3 154 aa10.74□□□□□ -0.69
SNIP1-202ENST00000468040 A0A087WWC5 75 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 C7orf77A4D0Y5 90 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 TRGC1P0CF51 173 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 NTF3P20783 257 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 TWIST1Q15672 202 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
SNIP1-202ENST00000468040 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 IMMP2LQ96T52 175 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 TMEM242Q9NWH2 141 aa10.73□□□□□ -0.69
SNIP1-202ENST00000468040 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
SNIP1-202ENST00000468040 SLAQ13239 276 aa10.72□□□□□ -0.69
SNIP1-202ENST00000468040 FAM210BQ96KR6 192 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms