RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PRR31Q5SQ13 230 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 C16orf92Q96LL3 132 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 ZNF331Q9NQX6 463 aaPredicted RBP5.14□□□□□ -1.59
SCAF4-204ENST00000467731 TP53TG3Q9ULZ0 132 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 LOC102723971A0A1B0GUV8 181 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 H3BRM9 83 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 SOCS3O14543 225 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 TNFRSF6BO95407 300 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 EXOC3-AS1Q8N2X6 119 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 MRAPQ8TCY5 172 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 ZNF256Q9Y2P7 627 aaPredicted RBP5.13□□□□□ -1.59
SCAF4-204ENST00000467731 YTHDF2Q9Y5A9 579 aaKnown RBP5.13□□□□□ -1.59
SCAF4-204ENST00000467731 TRAV8-2A0A0B4J237 113 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 GGTLC3B5MD39 225 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 PAGE4O60829 102 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 PRB4P10163 310 aaPredicted RBP5.13□□□□□ -1.59
SCAF4-204ENST00000467731 CRISP2P16562 243 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 HLA-DMBP28068 263 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 Q0VG73 95 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 LCN12Q6JVE5 192 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 BAGE3Q86Y29 109 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 BAGE2Q86Y30 109 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 RNF182Q8N6D2 247 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 SPAG8Q99932 426 aaPredicted RBP5.13□□□□□ -1.59
SCAF4-204ENST00000467731 SLC50A1Q9BRV3 221 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 Q9H3A6 140 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 K7EQG2 157 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 M0R2Z0 102 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 M0R3E3 92 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 FAM162BQ5T6X4 162 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 TMEM78Q5T7P6 136 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 OR10AG1Q8NH19 301 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 ZC2HC1AQ96GY0 325 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 MAP1LC3CQ9BXW4 147 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 AAMDCQ9H7C9 122 aa5.13□□□□□ -1.59
SCAF4-204ENST00000467731 F5H768 121 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 ISLRO14498 428 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 ZNF688P0C7X2 276 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 BCL2P10415 239 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 ATP5G3P48201 142 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 TCTAP57738 103 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 LYPD1Q8N2G4 141 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 GRIFINA4D1Z8 144 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 PGPA6NDG6 321 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 OR4C46A6NHA9 309 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 C11orf94C9JXX5 98 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 C3orf79P0CE67 100 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 CT45A10P0DMU9 189 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 DNAJC30Q96LL9 226 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 C20orf173Q96LM9 149 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 SPCS1Q9Y6A9 102 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 ARL2-SNX15V9GYD0 113 aa5.12□□□□□ -1.59
SCAF4-204ENST00000467731 TRAV2A0A0B4J234 112 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 SEC61GP60059 68 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 SNRPD3P62318 126 aaKnown RBP5.11□□□□□ -1.59
SCAF4-204ENST00000467731 PSMG4Q5JS54 123 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 OTORQ9NRC9 128 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 H3BUT2 72 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 SLC25A5P05141 298 aaKnown RBP5.11□□□□□ -1.59
SCAF4-204ENST00000467731 CD7P09564 240 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 DEFB1P60022 68 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 GNG5P63218 68 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 SLC25A34Q6PIV7 304 aa5.11□□□□□ -1.59
SCAF4-204ENST00000467731 NAA38Q9BRA0 125 aaKnown RBP5.11□□□□□ -1.59
SCAF4-204ENST00000467731 SPANXB1Q9NS25 103 aaPredicted RBP5.11□□□□□ -1.59
SCAF4-204ENST00000467731 TCL1AP56279 114 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 BEAN1Q3B7T3 259 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 ODF3L2Q3SX64 289 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 RNASEKQ6P5S7 137 aaKnown RBP5.1□□□□□ -1.59
SCAF4-204ENST00000467731 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 MAP6D1Q9H9H5 199 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 CA1P00915 261 aaPredicted RBP5.1□□□□□ -1.59
SCAF4-204ENST00000467731 NHLRC4P0CG21 123 aaPredicted RBP5.1□□□□□ -1.59
SCAF4-204ENST00000467731 DEFB131AP59861 70 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 SAMD5Q5TGI4 173 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 ZFAND6Q6FIF0 208 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 SCO2A0A1W2PP80 73 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 PRAC2D3DTV9 90 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 F6UB75 175 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 F8W1H4 67 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 RPL23P62829 140 aaKnown RBP5.1□□□□□ -1.59
SCAF4-204ENST00000467731 APRG1Q8IVJ8 170 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 ATOH7Q8N100 152 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 SMIM7Q9BQ49 75 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 TXNDC17Q9BRA2 123 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 TM2D2Q9BX73 214 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 WFDC10AQ9H1F0 79 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 EPDR1Q9UM22 224 aa5.1□□□□□ -1.59
SCAF4-204ENST00000467731 IGKV2-40A0A087WW87 121 aaPredicted RBP5.09□□□□□ -1.59
SCAF4-204ENST00000467731 A0A1W2PPM0 123 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 IGKV2D-40P01614 121 aaPredicted RBP5.09□□□□□ -1.59
SCAF4-204ENST00000467731 TCRAP04437 139 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 FABP2P12104 132 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 NTF3P20783 257 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 CSN1S1P47710 185 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 EGFEM1PQ0D2K5 195 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 GDF5OSQ5U4N7 250 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms