RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 PLXNA4Q9HCM2 1894 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 FREM3P0C091 2139 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 CFAP47Q6ZTR5 3102 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 QSER1Q2KHR3 1735 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 TOGARAM1Q9Y4F4 1720 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 USP54Q70EL1 1684 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 ZFHX4Q86UP3 3567 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 TPT1P13693 172 aaKnown RBP0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 CASC2Q6XLA1 102 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 PRO3102Q9H379 93 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 TAF9BQ9HBM6 251 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 MED31Q9Y3C7 131 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 MYO5AQ9Y4I1 1855 aaKnown RBP0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 WNK3Q9BYP7 1800 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 CD163L1Q9NR16 1453 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 C5orf42Q9H799 3197 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 DOT1LQ8TEK3 1739 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 ZNF609O15014 1411 aa0.98□□□□□ -2.25
GAPVD1-211ENST00000467707 CFAP54Q96N23 3096 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 CEP290O15078 2479 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 WDFY4Q6ZS81 3184 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 ARFGEF1Q9Y6D6 1849 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 TRBV7-6A0A0J9YX20 115 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 TRBV27A0A0K0K1C4 114 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 IFNA21P01568 189 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 SAA1P0DJI8 122 aaPredicted RBP0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 PDE6GP18545 87 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 MAXP61244 160 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 DR1Q01658 176 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 OCIAD2Q56VL3 154 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 LINC00305Q7Z4B0 112 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 ATOH7Q8N100 152 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 OR9Q1Q8NGQ5 310 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 PPLO60437 1756 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 LY75O60449 1722 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 MON2Q7Z3U7 1717 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 NUP210LQ5VU65 1888 aa0.97□□□□□ -2.25
GAPVD1-211ENST00000467707 RGPD5Q99666 1765 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 DCHS1Q96JQ0 3298 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 NFAT5O94916 1531 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 A6NN06 94 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 CD14P08571 375 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 FOXA3P55318 350 aaPredicted RBP0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 ZCCHC23Q6ZST2 131 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 DDA1Q9BW61 102 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 CDH23Q9H251 3354 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 UBR3Q6ZT12 1888 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 TTC28Q96AY4 2481 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 SETXQ7Z333 2677 aaKnown RBP0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 SIP14410 1827 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 ADGRB1O14514 1584 aa0.96□□□□□ -2.26
GAPVD1-211ENST00000467707 TRPM7Q96QT4 1865 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 KIAA0100Q14667 2235 aaKnown RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 MRC1P22897 1456 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 TRAV13-1A0A0B4J241 112 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 TRBV30A0A0K0K1B3 111 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 IGHV3-30P01768 117 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 IGHV3-30-5P0DP03 117 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 POLR2HP52434 150 aaKnown RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 FXYD4P59646 89 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 LSM3P62310 102 aaKnown RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 CCSMST1Q4G0I0 132 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 IZUMO2Q6UXV1 221 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 C10orf111Q8N326 155 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 C5orf17Q8NAS9 161 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 AP1S3Q96PC3 154 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 CIB3Q96Q77 187 aaPredicted RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 SELENOSQ9BQE4 189 aa0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 EDC4Q6P2E9 1401 aaKnown RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 RBBP6Q7Z6E9 1792 aaKnown RBP0.95□□□□□ -2.26
GAPVD1-211ENST00000467707 AKAP11Q9UKA4 1901 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 USP34Q70CQ2 3546 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 C3orf85A0A1B0GTC6 90 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 ZNF727A8MUV8 499 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 H3BMG7 143 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 K7EIL1 84 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 PGRMC1O00264 195 aaKnown RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 PRB4P10163 310 aaPredicted RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 ARPC4P59998 168 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 SARNPP82979 210 aaKnown RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 ALX1Q15699 326 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 SPINK9Q5DT21 86 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 Q6ZQY7 126 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 SMIM15Q7Z3B0 74 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 AKAP14Q86UN6 197 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 RMND5BQ96G75 393 aaPredicted RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 MRPL40Q9NQ50 206 aaKnown RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 PIEZO1Q92508 2521 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 REV3LO60673 3130 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 FER1L6Q2WGJ9 1857 aa0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 ROCK2O75116 1388 aaKnown RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 FAM208AQ9UK61 1670 aaKnown RBP0.94□□□□□ -2.26
GAPVD1-211ENST00000467707 ZDBF2Q9HCK1 2354 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 LTN1O94822 1766 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 BCORQ6W2J9 1755 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 TRANK1O15050 2925 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 ANKRD26Q9UPS8 1709 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms