RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
COL4A1-202ENST00000467182 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
COL4A1-202ENST00000467182 KIR2DL5AQ8N109 375 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
COL4A1-202ENST00000467182 A0A1B0GW15 77 aa9.41□□□□□ -0.9
COL4A1-202ENST00000467182 AZU1P20160 251 aa9.41□□□□□ -0.9
COL4A1-202ENST00000467182 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
COL4A1-202ENST00000467182 CACNG7P62955 275 aa9.41□□□□□ -0.9
COL4A1-202ENST00000467182 ZNF493Q6ZR52 646 aa9.41□□□□□ -0.9
COL4A1-202ENST00000467182 IL17DQ8TAD2 202 aa9.41□□□□□ -0.9
COL4A1-202ENST00000467182 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
COL4A1-202ENST00000467182 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
COL4A1-202ENST00000467182 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
COL4A1-202ENST00000467182 GOLT1BQ9Y3E0 138 aa9.4□□□□□ -0.9
COL4A1-202ENST00000467182 TIMM8BQ9Y5J9 83 aaPredicted RBP9.4□□□□□ -0.9
COL4A1-202ENST00000467182 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
COL4A1-202ENST00000467182 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 PLAC8L1A1L4L8 177 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 HLA-DQA1P01909 254 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 MT-ND6P03923 174 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 SSTP61278 116 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 SLAQ13239 276 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 TWIST1Q15672 202 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 RNASE8Q8TDE3 154 aaKnown RBP9.39□□□□□ -0.91
COL4A1-202ENST00000467182 FRZBQ92765 325 aa9.39□□□□□ -0.91
COL4A1-202ENST00000467182 HTN1P15515 57 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 APOC4P55056 127 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 X6R8D5 127 aa9.38□□□□□ -0.91
COL4A1-202ENST00000467182 C1orf196B1AJZ1 125 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 M0R381 172 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 S100A8P05109 93 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 RAB4BP61018 213 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 PTH2Q96A98 100 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
COL4A1-202ENST00000467182 UBE2CO00762 179 aa9.36□□□□□ -0.91
COL4A1-202ENST00000467182 APCSP02743 223 aa9.36□□□□□ -0.91
COL4A1-202ENST00000467182 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
COL4A1-202ENST00000467182 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
COL4A1-202ENST00000467182 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
COL4A1-202ENST00000467182 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
COL4A1-202ENST00000467182 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
COL4A1-202ENST00000467182 K7EIL1 84 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 EVI2AP22794 236 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 LINC00315P59091 139 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
COL4A1-202ENST00000467182 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 SPXQ9BT56 116 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 JPT2Q9H910 190 aa9.35□□□□□ -0.91
COL4A1-202ENST00000467182 M0R2P5 195 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 PRB2P02812 416 aaPredicted RBP9.34□□□□□ -0.91
COL4A1-202ENST00000467182 RAB4AP20338 218 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 RAB5BP61020 215 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 POM121L12Q8N7R1 296 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 RNF183Q96D59 192 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 C16orf74Q96GX8 76 aa9.34□□□□□ -0.91
COL4A1-202ENST00000467182 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
COL4A1-202ENST00000467182 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 Q6ZWC4 215 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 C14orf178Q8N769 122 aaPredicted RBP9.33□□□□□ -0.92
COL4A1-202ENST00000467182 SYT8Q8NBV8 401 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
COL4A1-202ENST00000467182 U3KQK5 164 aa9.33□□□□□ -0.92
COL4A1-202ENST00000467182 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 CRYGDP07320 174 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 DAZ2Q13117 558 aaKnown RBP9.32□□□□□ -0.92
COL4A1-202ENST00000467182 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 RASL10AQ92737 203 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 OVOL2Q9BRP0 275 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 SAMD10Q9BYL1 202 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
COL4A1-202ENST00000467182 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
COL4A1-202ENST00000467182 GAS8-AS1O95177 125 aa9.31□□□□□ -0.92
COL4A1-202ENST00000467182 SRIP30626 198 aa9.31□□□□□ -0.92
COL4A1-202ENST00000467182 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms