RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 METTL1Q9UBP6 276 aaKnown RBP-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 ERG28Q9UKR5 140 aa-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 NOP16Q9Y3C1 178 aaKnown RBP-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 HRNRQ86YZ3 2850 aaPredicted RBP-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 PTPRDP23468 1912 aa-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 ABCA1O95477 2261 aa-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 NUP210LQ5VU65 1888 aa-0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 FAM135BQ49AJ0 1406 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 NCOR1O75376 2440 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 WNK2Q9Y3S1 2297 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 TRBV7-1A0A0A6YYK4 115 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 TRAV2A0A0B4J234 112 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 A0A1W2PRE2 83 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 TSTD3H0UI37 97 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 TFF1P04155 84 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 PAEPP09466 180 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 SSBP1Q04837 148 aaKnown RBP-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM78Q5T7P6 136 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 SLC25A26Q70HW3 274 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 DYNLRB2Q8TF09 96 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 NAT14Q8WUY8 206 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 CARD19Q96LW7 228 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 BANF2Q9H503 90 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 V9GYV3 84 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 SPTBN2O15020 2390 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 UBR2Q8IWV8 1755 aa-0.04□□□□□ -2.42
CHMP2B-202ENST00000466696 ADGBQ8N7X0 1667 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 CPDO75976 1380 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 ESPL1Q14674 2120 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 AKAP6Q13023 2319 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 A0A0D9SFI3 127 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 A6NIN4 97 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM238C9JI98 176 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 J3KT08 172 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 J3QLW9 94 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 APOC4-APOC2K7ER74 178 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 DEGS1O15121 323 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 TCRAP04437 139 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 SLC25A5P05141 298 aaKnown RBP-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 CMPK1P30085 196 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 GNG10P50151 68 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 POLR2HP52434 150 aaKnown RBP-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 OR8B8Q15620 311 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 TOMM20LQ6UXN7 152 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 NDUFA11Q86Y39 141 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 NDUFAF1Q9Y375 327 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 USP54Q70EL1 1684 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 CTTNBP2Q8WZ74 1663 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 RREB1Q92766 1687 aa-0.05□□□□□ -2.42
CHMP2B-202ENST00000466696 CACNA1AO00555 2505 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 MED23Q9ULK4 1368 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 MED13LQ71F56 2210 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 FAM92AA1XBS5 289 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM14DPA8MWL7 114 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 CCDC179H3BU77 68 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 M0R3E3 92 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 NPFFO15130 113 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 RPL7P18124 248 aaKnown RBP-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 S100A3P33764 101 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 ELOF1P60002 83 aaKnown RBP-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 SPCS2Q15005 226 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM128Q5BJH2 165 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 CLLU1Q5K131 121 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 PPP1R2P3Q6NXS1 205 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 SMIM15Q7Z3B0 74 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 ATP6V0E2Q8NHE4 81 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 COX7B2Q8TF08 81 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 SELENOSQ9BQE4 189 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 SPANXCQ9NY87 97 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 PRO0255Q9UI72 69 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 HSPB11Q9Y547 144 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 LRP1Q07954 4544 aaKnown RBP-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 OVOS2A0A0G2JMS6 1433 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 PTPRGP23470 1445 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 KIAA1549LQ6ZVL6 1849 aa-0.06□□□□□ -2.42
CHMP2B-202ENST00000466696 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 ANK1P16157 1881 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 GVQW2A0A096LPI5 108 aaPredicted RBP-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 TRAV22A0A0B4J277 110 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 SLC25A6P12236 298 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 CCL3L1P16619 93 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 NCS1P62166 190 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 TFAMQ00059 246 aaKnown RBP-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 EMX2Q04743 252 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 TCTE3Q8IZS6 198 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 C20orf197Q8N268 126 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 IFI27L1Q96BM0 104 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 CENPHQ9H3R5 247 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 NPVFQ9HCQ7 196 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 BATF3Q9NR55 127 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 SPANXA1Q9NS26 97 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 FLNAP21333 2647 aaKnown RBP-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 ATG2AQ2TAZ0 1938 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 F5P12259 2224 aa-0.07□□□□□ -2.42
CHMP2B-202ENST00000466696 TRAV12-3A0A0B4J271 114 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 ZNF815PA8K554 130 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 IFNA17P01571 189 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 MT-ND4LP03901 98 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 FABP1P07148 127 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms