RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TRBV10-1A0A0K0K1A3 114 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 FXYD1O00168 92 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 DEGS1O15121 323 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 PAEPP09466 180 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 HIST1H1BP16401 226 aaKnown RBP0.14□□□□□ -2.39
SMC4-205ENST00000465563 PLGLB1Q02325 96 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 IQCJQ1A5X6 159 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 TMEM244Q5VVB8 128 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 ASXL3Q9C0F0 2248 aa0.13□□□□□ -2.39
SMC4-205ENST00000465563 C9JAW5 83 aa0.13□□□□□ -2.39
SMC4-205ENST00000465563 TSKUQ8WUA8 353 aa0.13□□□□□ -2.39
SMC4-205ENST00000465563 TMEM14BQ9NUH8 114 aa0.13□□□□□ -2.39
SMC4-205ENST00000465563 HIGD1AQ9Y241 93 aa0.13□□□□□ -2.39
SMC4-205ENST00000465563 OR2H2O95918 312 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 HLA-DRB4P13762 266 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 POLR2JP52435 117 aaKnown RBP0.12□□□□□ -2.39
SMC4-205ENST00000465563 SLC25A26Q70HW3 274 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 SLC35B3Q9H1N7 401 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 HLA-DRB4X5D2U9 266 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 KDM6BO15054 1643 aa0.12□□□□□ -2.39
SMC4-205ENST00000465563 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
SMC4-205ENST00000465563 UHRF1BP1LA0JNW5 1464 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 MPC1LP0DKB6 136 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 AKR1D1P51857 326 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 UNQ5815/PRO19632Q6UWF5 114 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 PPDPFLQ8WWR9 84 aa0.11□□□□□ -2.39
SMC4-205ENST00000465563 MRPL40Q9NQ50 206 aaKnown RBP0.11□□□□□ -2.39
SMC4-205ENST00000465563 TNS1Q9HBL0 1735 aaKnown RBP0.1□□□□□ -2.39
SMC4-205ENST00000465563 TRAV2A0A0B4J234 112 aa0.1□□□□□ -2.39
SMC4-205ENST00000465563 TCTE3Q8IZS6 198 aa0.1□□□□□ -2.39
SMC4-205ENST00000465563 BANF2Q9H503 90 aa0.1□□□□□ -2.39
SMC4-205ENST00000465563 ZFYVE26Q68DK2 2539 aa0.1□□□□□ -2.39
SMC4-205ENST00000465563 PTPRMP28827 1452 aa0.1□□□□□ -2.39
SMC4-205ENST00000465563 OTOGQ6ZRI0 2925 aa0.09□□□□□ -2.39
SMC4-205ENST00000465563 TEX49A0A1B0GTD5 131 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 PYYP10082 97 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 EMX2Q04743 252 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 MORN2Q502X0 79 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 TAS2R8Q9NYW2 309 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 CALML5Q9NZT1 146 aa0.09□□□□□ -2.4
SMC4-205ENST00000465563 POLQO75417 2590 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 PHIPQ8WWQ0 1821 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 PIEZO1Q92508 2521 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 BORCS7-ASMTA0A0B4J1R7 106 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 TRAV17A0A0B4J275 112 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 TFF1P04155 84 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 OR2T2Q6IF00 324 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 ATP6V0E2Q8NHE4 81 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 SPANXA1Q9NS26 97 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 SPANXCQ9NY87 97 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 CCDC171Q6TFL3 1326 aa0.08□□□□□ -2.4
SMC4-205ENST00000465563 SMIM24O75264 130 aa0.07□□□□□ -2.4
SMC4-205ENST00000465563 CMPK1P30085 196 aa0.07□□□□□ -2.4
SMC4-205ENST00000465563 ELOF1P60002 83 aaKnown RBP0.07□□□□□ -2.4
SMC4-205ENST00000465563 CCDC153Q494R4 210 aa0.07□□□□□ -2.4
SMC4-205ENST00000465563 PROK2Q9HC23 129 aa0.07□□□□□ -2.4
SMC4-205ENST00000465563 ANKRD30AQ9BXX3 1397 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
SMC4-205ENST00000465563 PARP14Q460N5 1801 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 SCGB1A1P11684 91 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 SLC25A6P12236 298 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 DR1Q01658 176 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 ATP11AUNQ6ZP68 121 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 SNX29P2Q8IUI4 249 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 DYNLRB2Q8TF09 96 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 MAGOHBQ96A72 148 aaKnown RBP0.06□□□□□ -2.4
SMC4-205ENST00000465563 LSM2Q9Y333 95 aaKnown RBP0.06□□□□□ -2.4
SMC4-205ENST00000465563 MUC22E2RYF6 1773 aaPredicted RBP0.06□□□□□ -2.4
SMC4-205ENST00000465563 SYNJ1O43426 1573 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 AHCTF1Q8WYP5 2266 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 NCOR2Q9Y618 2525 aa0.06□□□□□ -2.4
SMC4-205ENST00000465563 IGSF10Q6WRI0 2623 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 UNC13AQ9UPW8 1703 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 LAMB1P07942 1786 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 TRAV12-2A0A075B6T6 113 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 M0R2P5 195 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 DBIP07108 87 aaKnown RBP0.05□□□□□ -2.4
SMC4-205ENST00000465563 VMO1Q7Z5L0 202 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 NDUFA11Q86Y39 141 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 DSCR8Q96T75 97 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 VPS25Q9BRG1 176 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 HRNRQ86YZ3 2850 aaPredicted RBP0.05□□□□□ -2.4
SMC4-205ENST00000465563 CELSR2Q9HCU4 2923 aa0.05□□□□□ -2.4
SMC4-205ENST00000465563 CACNA1CQ13936 2221 aa0.04□□□□□ -2.4
SMC4-205ENST00000465563 A0A087WTM6 91 aa0.04□□□□□ -2.4
SMC4-205ENST00000465563 CLLU1Q5K131 121 aa0.04□□□□□ -2.4
SMC4-205ENST00000465563 TMEM141Q96I45 108 aa0.04□□□□□ -2.4
SMC4-205ENST00000465563 BET1LQ9NYM9 111 aa0.04□□□□□ -2.4
SMC4-205ENST00000465563 NOP16Q9Y3C1 178 aaKnown RBP0.04□□□□□ -2.4
SMC4-205ENST00000465563 ARFGEF1Q9Y6D6 1849 aa0.03□□□□□ -2.4
SMC4-205ENST00000465563 MCRIP1C9JLW8 97 aa0.03□□□□□ -2.4
SMC4-205ENST00000465563 RBP4P02753 201 aa0.03□□□□□ -2.4
SMC4-205ENST00000465563 AKAP14Q86UN6 197 aa0.03□□□□□ -2.4
SMC4-205ENST00000465563 COA4Q9NYJ1 87 aa0.03□□□□□ -2.4
SMC4-205ENST00000465563 DMBT1Q9UGM3 2413 aaPredicted RBP0.03□□□□□ -2.41
SMC4-205ENST00000465563 ANK2Q01484 3957 aa0.03□□□□□ -2.41
SMC4-205ENST00000465563 NRXN2Q9P2S2 1712 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 YPEL1O60688 119 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 APOC1P02654 83 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 315.2 ms