RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
CLCNKA-204ENST00000464764 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 IGF2-ASQ6U949 168 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 M0R1W7 72 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 CRYBA4P53673 196 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 Q6ZS46 218 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 METTL26Q96S19 204 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 C1QTNF4Q9BXJ3 329 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 PTPRQQ9UMZ3 2332 aa9.55□□□□□ -0.88
CLCNKA-204ENST00000464764 H7C2G1 150 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 CRYGDP07320 174 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 FAM110DQ8TAY7 271 aaPredicted RBP9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 DLX4Q92988 240 aaPredicted RBP9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 MRAP2Q96G30 205 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 ARL3P36405 182 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 ANXA2RQ3ZCQ2 193 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 TIMD4Q96H15 378 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 JPT2Q9H910 190 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 PHLDA3Q9Y5J5 127 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 COX6B1P14854 86 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 XGP55808 180 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 EBI3Q14213 229 aa9.54□□□□□ -0.88
CLCNKA-204ENST00000464764 TSHBP01222 138 aa9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 RPL39P62891 51 aaKnown RBP9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 UBE2D1P51668 147 aa9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 KIR2DL4Q99706 377 aa9.53□□□□□ -0.88
CLCNKA-204ENST00000464764 TCL1BO95988 128 aa9.52□□□□□ -0.88
CLCNKA-204ENST00000464764 TRBV12-3P01733 135 aa9.52□□□□□ -0.88
CLCNKA-204ENST00000464764 CD7P09564 240 aa9.52□□□□□ -0.88
CLCNKA-204ENST00000464764 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.88
CLCNKA-204ENST00000464764 UNQ9165/PRO28630Q6UXU0 137 aa9.52□□□□□ -0.88
CLCNKA-204ENST00000464764 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 GATA3P23771 443 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 AJUBAQ96IF1 538 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 GPHB5Q86YW7 130 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 MUC4Q99102 2169 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 DPH3P1Q9H4G8 78 aa9.52□□□□□ -0.89
CLCNKA-204ENST00000464764 LINC01619G3V211 115 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 RPL11P62913 178 aaKnown RBP9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 IGF2RP11717 2491 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 CRYBG3Q68DQ2 2970 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 IGHV3OR16-10A0A075B7F0 116 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
CLCNKA-204ENST00000464764 IGLV4-69A0A075B6H9 119 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 A0A0J9YY99 117 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 TP53TG1Q9Y2A0 90 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 CFC1P0CG37 223 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 SRD5A1P18405 259 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 UBE2D3P61077 147 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 UBE2D2P62837 147 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 Q6ZUT4 128 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 EEF1AKMT3Q96AZ1 226 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 CCL21O00585 134 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 SAA4P35542 130 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 ASIPP42127 132 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 OPRPNQ99935 248 aaPredicted RBP9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 U3KQE9 123 aa9.5□□□□□ -0.89
CLCNKA-204ENST00000464764 C2CD3Q4AC94 2353 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 A0A087WWL8 130 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 ITLN2Q8WWU7 325 aaPredicted RBP9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 A6NJY4 79 aa9.49□□□□□ -0.89
CLCNKA-204ENST00000464764 CSPG4Q6UVK1 2322 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 IGHV3-64A0A075B6Q5 118 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 CRIP2P52943 208 aaPredicted RBP9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 MINOS1Q5TGZ0 78 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 MINOS1-NBL1R4GNA1 71 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 TRAV21A0A0B4J279 112 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
CLCNKA-204ENST00000464764 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 OR10J6PQ8NGY7 276 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 RNF183Q96D59 192 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
CLCNKA-204ENST00000464764 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 CENPVL3A0A0U1RRI6 287 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 A0A1W2PPR1 153 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 OOSP1A8MZH6 123 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 F5H697 171 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms