RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 PGPEP1LA6NFU8 196 aa9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 XGP55808 180 aa9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 NKX6-2Q9C056 277 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-203ENST00000463988 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 OR10J3Q5JRS4 329 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 LELP1Q5T871 98 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
SNRNP40-203ENST00000463988 FXYD6-FXYD2A0A087WZ82 144 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 IGHV3-73A0A0B4J1V6 119 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 FABP5P3A8MUU1 101 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 A8MWV9 139 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 IFNA7P01567 189 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 GCSHP23434 173 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 NTN5Q8WTR8 489 aaPredicted RBP9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 HIST1H2BAQ96A08 127 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 ARL2-SNX15V9GYD0 113 aa9.64□□□□□ -0.87
SNRNP40-203ENST00000463988 FAT1Q14517 4588 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 TRAV34A0A0B4J273 112 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 PEX7O00628 323 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 PSCAO43653 123 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 ASIPP42127 132 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 OR2T35Q8NGX2 323 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 PARLQ9H300 379 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
SNRNP40-203ENST00000463988 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 LAGE3Q14657 143 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 DNLZQ5SXM8 178 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 COX8CQ7Z4L0 72 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 Q86TA4 180 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 ZFP30Q9Y2G7 519 aa9.62□□□□□ -0.87
SNRNP40-203ENST00000463988 DMBT1Q9UGM3 2413 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 LINC00694P0DN24 101 aa9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 UBE2G2P60604 165 aa9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 Q6ZSN1 163 aa9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 TCEAL7Q9BRU2 100 aa9.61□□□□□ -0.87
SNRNP40-203ENST00000463988 B4DEV8 164 aa9.6□□□□□ -0.87
SNRNP40-203ENST00000463988 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
SNRNP40-203ENST00000463988 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
SNRNP40-203ENST00000463988 A0A087WWC5 75 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 IGLV5-52A0A0A0MRZ9 124 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 KRBOX1C9JBD0 128 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 G3V3Q6 166 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 RHODO00212 210 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 FHITP49789 147 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 CRIP1P50238 77 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 FGF8P55075 233 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 Q8N814 137 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 FRZBQ92765 325 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 FMC1Q96HJ9 113 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 TMEM70Q9BUB7 260 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 Q9HAA7 133 aa9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 SRRM2Q9UQ35 2752 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-203ENST00000463988 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 GAGE1Q13065 139 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 GAGE4Q13068 117 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 GAGE5Q13069 117 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 GAGE13Q4V321 117 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 FAM162BQ5T6X4 162 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 ZC2HC1AQ96GY0 325 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 CYTL1Q9NRR1 136 aa9.58□□□□□ -0.88
SNRNP40-203ENST00000463988 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 H3BVH4 76 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 SH2D1AO60880 128 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 ARMS2P0C7Q2 107 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 TOR2AQ5JU69 321 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 Q5VSD8 79 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 OR11H4Q8NGC9 324 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 STOML3Q8TAV4 291 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 JPT2Q9H910 190 aa9.57□□□□□ -0.88
SNRNP40-203ENST00000463988 ARPC5O15511 151 aa9.56□□□□□ -0.88
SNRNP40-203ENST00000463988 LTAP01374 205 aa9.56□□□□□ -0.88
SNRNP40-203ENST00000463988 UBE2G1P62253 170 aa9.56□□□□□ -0.88
SNRNP40-203ENST00000463988 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
SNRNP40-203ENST00000463988 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms