RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FAM19A4Q96LR4 140 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 GPR82Q96P67 336 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 SLC50A1Q9BRV3 221 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 PARLQ9H300 379 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 SAV1Q9H4B6 383 aaPredicted RBP2.57□□□□□ -2
SCFD1-204ENST00000463622 CLEC5AQ9NY25 188 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 VAX2Q9UIW0 290 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 AGRNO00468 2067 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 TRAV2A0A0B4J234 112 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 OR4C46A6NHA9 309 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 OR11H12B2RN74 326 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 TSHBP01222 138 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 SFTA3P0C7M3 94 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 HLA-DRB4P13762 266 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 RPL35P42766 123 aaKnown RBP2.56□□□□□ -2
SCFD1-204ENST00000463622 OR5I1Q13606 314 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 SPINK13Q1W4C9 94 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 ZNF674Q2M3X9 581 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 CENPWQ5EE01 88 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 PRNTQ86SH4 94 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 LRRC20Q8TCA0 184 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 PHLDA1Q8WV24 401 aaPredicted RBP2.56□□□□□ -2
SCFD1-204ENST00000463622 ZC2HC1AQ96GY0 325 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 EIF5A2Q9GZV4 153 aaKnown RBP2.56□□□□□ -2
SCFD1-204ENST00000463622 TREM1Q9NP99 234 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 MANBALQ9NQG1 85 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 MED9Q9NWA0 146 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 PSG8Q9UQ74 426 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 TP53TG1Q9Y2A0 90 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 HLA-DRB4X5D2U9 266 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 A0A087X002 238 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 A0A0J9YWU9 116 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 AKR1C3P42330 323 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 MEOX2P50222 304 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 TCTAP57738 103 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 RAB14P61106 215 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 RPL19P84098 196 aaKnown RBP2.56□□□□□ -2
SCFD1-204ENST00000463622 PSG9Q00887 426 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 ATRAIDQ6UW56 229 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 FOXI2Q6ZQN5 318 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 C1orf158Q8N1D5 194 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 LYPD1Q8N2G4 141 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 MRPL53Q96EL3 112 aaKnown RBP2.56□□□□□ -2
SCFD1-204ENST00000463622 ATG101Q9BSB4 218 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 SRD5A3Q9H8P0 318 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 ZNF492Q9P255 531 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 KLF12Q9Y4X4 402 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 ARL2-SNX15V9GYD0 113 aa2.56□□□□□ -2
SCFD1-204ENST00000463622 UBR4Q5T4S7 5183 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 TMEM218A2RU14 115 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 RTL8CO15255 209 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 LTAP01374 205 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 BMI1P35226 326 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 SNRPD3P62318 126 aaKnown RBP2.55□□□□□ -2
SCFD1-204ENST00000463622 RPL23P62829 140 aaKnown RBP2.55□□□□□ -2
SCFD1-204ENST00000463622 PAFAH1B2P68402 229 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 FLI1Q01543 452 aaPredicted RBP2.55□□□□□ -2
SCFD1-204ENST00000463622 TMEM183BQ1AE95 376 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 Q75L30 129 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 EIF4E3Q8N5X7 224 aaKnown RBP2.55□□□□□ -2
SCFD1-204ENST00000463622 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 OCC1Q8TAD7 63 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 XCL2Q9UBD3 114 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 TP53TG3Q9ULZ0 132 aa2.55□□□□□ -2
SCFD1-204ENST00000463622 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 KRTAP16-1A8MUX0 517 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 KLLNB2CW77 178 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ZNF324O75467 553 aaPredicted RBP2.54□□□□□ -2
SCFD1-204ENST00000463622 CDK2AP2O75956 126 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 CA1P00915 261 aaPredicted RBP2.54□□□□□ -2
SCFD1-204ENST00000463622 IFNA1P01562 189 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 GZMBP10144 247 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 CRISP2P16562 243 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ID1P41134 155 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ZNF138P52744 262 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 MUC21Q5SSG8 566 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 C10orf91Q5T1B1 145 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 S100A7AQ86SG5 101 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 LINC01551Q86U37 167 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 CMTM2Q8TAZ6 248 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 HIST1H2BAQ96A08 127 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 RNASE7Q9H1E1 156 aaKnown RBP2.54□□□□□ -2
SCFD1-204ENST00000463622 APLNQ9ULZ1 77 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PRELID1Q9Y255 219 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 TMSB15BA0A087X1C1 80 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 LOC102724200A0A096LPH7 203 aaPredicted RBP2.54□□□□□ -2
SCFD1-204ENST00000463622 TRBV6-1A0A0K0K1D8 114 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PLAC8L1A1L4L8 177 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 RBAKDNA6NC62 111 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 C19orf71A6NCJ1 209 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ZNF727A8MUV8 499 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 TMEM250H0YL14 139 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 M0R036 132 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 UBE2CO00762 179 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PDE6DO43924 150 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 SH2D1AO60880 128 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ATP6V1G1O75348 118 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms