RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TP53TG3Q9ULZ0 132 aa13.92□□□□□ -0.18
CCDC78-206ENST00000463539 CBY3A6NI87 242 aa13.92□□□□□ -0.18
CCDC78-206ENST00000463539 RPL35AP18077 110 aaKnown RBP13.92□□□□□ -0.18
CCDC78-206ENST00000463539 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
CCDC78-206ENST00000463539 TRGV11A0A075B6L2 103 aa13.91□□□□□ -0.18
CCDC78-206ENST00000463539 IGHV4-4A0A075B6R2 117 aa13.91□□□□□ -0.18
CCDC78-206ENST00000463539 IGHV3-16A0A0C4DH30 117 aa13.91□□□□□ -0.18
CCDC78-206ENST00000463539 M0R381 172 aa13.9□□□□□ -0.18
CCDC78-206ENST00000463539 HTN1P15515 57 aa13.9□□□□□ -0.18
CCDC78-206ENST00000463539 SRIP30626 198 aa13.9□□□□□ -0.18
CCDC78-206ENST00000463539 LINC01587Q99440 93 aa13.9□□□□□ -0.18
CCDC78-206ENST00000463539 LOC102724200A0A096LPH7 203 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-206ENST00000463539 TMEM191AQ9H0A3 160 aa13.9□□□□□ -0.18
CCDC78-206ENST00000463539 C5orf52A6NGY3 159 aa13.89□□□□□ -0.19
CCDC78-206ENST00000463539 SPRY2O43597 315 aa13.89□□□□□ -0.19
CCDC78-206ENST00000463539 MORN3Q6PF18 240 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-206ENST00000463539 TMEM208Q9BTX3 173 aa13.89□□□□□ -0.19
CCDC78-206ENST00000463539 MDFICQ9P1T7 246 aa13.89□□□□□ -0.19
CCDC78-206ENST00000463539 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
CCDC78-206ENST00000463539 SMIM15Q7Z3B0 74 aa13.88□□□□□ -0.19
CCDC78-206ENST00000463539 AMN1Q8IY45 258 aa13.88□□□□□ -0.19
CCDC78-206ENST00000463539 TMEM256Q8N2U0 113 aa13.88□□□□□ -0.19
CCDC78-206ENST00000463539 LOC105371267A0A1B0GV96 52 aa13.87□□□□□ -0.19
CCDC78-206ENST00000463539 C9orf85Q96MD7 179 aa13.87□□□□□ -0.19
CCDC78-206ENST00000463539 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
CCDC78-206ENST00000463539 C1QTNF4Q9BXJ3 329 aa13.87□□□□□ -0.19
CCDC78-206ENST00000463539 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-206ENST00000463539 ALKBH7Q9BT30 221 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-206ENST00000463539 NXPH4O95158 308 aa13.86□□□□□ -0.19
CCDC78-206ENST00000463539 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
CCDC78-206ENST00000463539 C1orf158Q8N1D5 194 aa13.86□□□□□ -0.19
CCDC78-206ENST00000463539 IGHV3OR16-12A0A075B7B8 117 aa13.85□□□□□ -0.19
CCDC78-206ENST00000463539 EVI2AP22794 236 aa13.85□□□□□ -0.19
CCDC78-206ENST00000463539 OXLD1Q5BKU9 147 aa13.85□□□□□ -0.19
CCDC78-206ENST00000463539 COA6Q5JTJ3 125 aaKnown RBP13.85□□□□□ -0.19
CCDC78-206ENST00000463539 OR10J3Q5JRS4 329 aa13.85□□□□□ -0.19
CCDC78-206ENST00000463539 PRM2P04554 102 aa13.84□□□□□ -0.19
CCDC78-206ENST00000463539 Q0VG73 95 aa13.84□□□□□ -0.19
CCDC78-206ENST00000463539 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
CCDC78-206ENST00000463539 AP1S3Q96PC3 154 aa13.84□□□□□ -0.19
CCDC78-206ENST00000463539 GOLT1BQ9Y3E0 138 aa13.84□□□□□ -0.19
CCDC78-206ENST00000463539 UBE2CO00762 179 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 HOXA5P20719 270 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 ZNF415Q09FC8 603 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 BAGE3Q86Y29 109 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 SYT8Q8NBV8 401 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 ANK2Q01484 3957 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 C18orf32Q8TCD1 76 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 RNF185Q96GF1 192 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 CSTL1Q9H114 145 aa13.83□□□□□ -0.2
CCDC78-206ENST00000463539 D6R8Y8 96 aa13.82□□□□□ -0.2
CCDC78-206ENST00000463539 RAB4AP20338 218 aa13.82□□□□□ -0.2
CCDC78-206ENST00000463539 ORMDL3Q8N138 153 aa13.82□□□□□ -0.2
CCDC78-206ENST00000463539 CSNK1G2-AS1Q8NCQ2 148 aa13.81□□□□□ -0.2
CCDC78-206ENST00000463539 GSN-AS1Q9NRJ2 163 aa13.81□□□□□ -0.2
CCDC78-206ENST00000463539 CKS2P33552 79 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 IQCJQ1A5X6 159 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 PDZD11Q5EBL8 140 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-206ENST00000463539 U3KQK5 164 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 ZNF876PQ49A33 203 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 HIST3H2BBQ8N257 126 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 C11orf72Q8NBR9 251 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
CCDC78-206ENST00000463539 PKD1L1Q8TDX9 2849 aa13.79□□□□□ -0.2
CCDC78-206ENST00000463539 PPBPP02775 128 aa13.79□□□□□ -0.2
CCDC78-206ENST00000463539 PRELID3AQ96N28 172 aa13.79□□□□□ -0.2
CCDC78-206ENST00000463539 ZMAT5Q9UDW3 170 aaKnown RBP13.79□□□□□ -0.2
CCDC78-206ENST00000463539 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 SERF1AO75920 110 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 NCR2O95944 276 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 AZU1P20160 251 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 EGFEM1PQ0D2K5 195 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 MDFIQ99750 246 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 S100A2P29034 98 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 KRTAP10-11P60412 298 aa13.78□□□□□ -0.2
CCDC78-206ENST00000463539 M0R2P5 195 aa13.77□□□□□ -0.21
CCDC78-206ENST00000463539 LINC00310P59036 64 aa13.77□□□□□ -0.21
CCDC78-206ENST00000463539 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-206ENST00000463539 RNASE8Q8TDE3 154 aaKnown RBP13.77□□□□□ -0.21
CCDC78-206ENST00000463539 TMEM263Q8WUH6 116 aaKnown RBP13.77□□□□□ -0.21
CCDC78-206ENST00000463539 SPXQ9BT56 116 aa13.77□□□□□ -0.21
CCDC78-206ENST00000463539 KIR2DL5BA0A0G2JN68 375 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 KIR2DL5BA0A0G2JPC4 375 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 MGPP08493 103 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 APOC4P55056 127 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 KIR2DL5AQ8N109 375 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 KIR2DL5BQ8NHK3 375 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 JPT2Q9H910 190 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 MRAP2Q96G30 205 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 KIF25-AS1Q9Y6Z4 181 aa13.76□□□□□ -0.21
CCDC78-206ENST00000463539 A0A087WWL8 130 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 TRAV26-2A0A0B4J265 109 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 IFITM10A6NMD0 228 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 NUPR1O60356 82 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 IGHV4-30-4P0DP06 118 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 MUC4Q99102 2169 aa13.75□□□□□ -0.21
CCDC78-206ENST00000463539 GAS8-AS1O95177 125 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms