RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 CELSR2Q9HCU4 2923 aa1.65□□□□□ -2.15
HERC4-208ENST00000463478 ANKRD31Q8N7Z5 1873 aa1.65□□□□□ -2.15
HERC4-208ENST00000463478 HEATR5BQ9P2D3 2071 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 IGKV2-40A0A087WW87 121 aaPredicted RBP1.64□□□□□ -2.15
HERC4-208ENST00000463478 A6NN06 94 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 ZNF670-ZNF695F2Z2N8 137 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 EDF1O60869 148 aaKnown RBP1.64□□□□□ -2.15
HERC4-208ENST00000463478 IGKV2D-40P01614 121 aaPredicted RBP1.64□□□□□ -2.15
HERC4-208ENST00000463478 ZNF625Q96I27 306 aaPredicted RBP1.64□□□□□ -2.15
HERC4-208ENST00000463478 CDC42SE1Q9NRR8 79 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 TMEM14CQ9P0S9 112 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 FER1L6Q2WGJ9 1857 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 CCDC88AQ3V6T2 1871 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 MGAM2Q2M2H8 2515 aa1.64□□□□□ -2.15
HERC4-208ENST00000463478 TENM3Q9P273 2699 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 PTPRZ1P23471 2315 aaPredicted RBP1.63□□□□□ -2.15
HERC4-208ENST00000463478 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 COL24A1Q17RW2 1714 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 CC2D2AQ9P2K1 1620 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 FRYQ5TBA9 3013 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 HCRTO43612 131 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 PYYP10082 97 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 RRAS2P62070 204 aaPredicted RBP1.63□□□□□ -2.15
HERC4-208ENST00000463478 IDO2Q6ZQW0 420 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 C3orf62Q6ZUJ4 267 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 PPDPFLQ8WWR9 84 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 COPS9Q8WXC6 57 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 CGREF1Q99674 301 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 PPRC1Q5VV67 1664 aaKnown RBP1.63□□□□□ -2.15
HERC4-208ENST00000463478 NAIPQ13075 1403 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 CDH23Q9H251 3354 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 HERC1Q15751 4861 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 NUMA1Q14980 2115 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 GRIN2AQ12879 1464 aa1.63□□□□□ -2.15
HERC4-208ENST00000463478 N4BP2Q86UW6 1770 aaPredicted RBP1.62□□□□□ -2.15
HERC4-208ENST00000463478 ANAPC1Q9H1A4 1944 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 IGKV3-7A0A075B6H7 116 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 A0A1W2PPB8 328 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 A0A1W2PRS3 328 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 KIR3DP1A8MWS1 328 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 IGHV3-30P01768 117 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 APODP05090 189 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 IGHV3-30-5P0DP03 117 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 RHOHQ15669 191 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 WHAMMP3Q1A5X7 153 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 CLLU1Q5K131 121 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 GDF5OSQ5U4N7 250 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 LINC00322Q6ZN03 302 aaPredicted RBP1.62□□□□□ -2.15
HERC4-208ENST00000463478 TMEM203Q969S6 136 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 C2orf88Q9BSF0 95 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 FGD6Q6ZV73 1430 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 SMG6Q86US8 1419 aaKnown RBP1.62□□□□□ -2.15
HERC4-208ENST00000463478 LRBAP50851 2863 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 DOCK10Q96BY6 2186 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 TGP01266 2768 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 PRUNE2Q8WUY3 3088 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 SORL1Q92673 2214 aa1.62□□□□□ -2.15
HERC4-208ENST00000463478 LOC107984156A0A0G2JMH3 177 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 FAM236AA0A1B0GUQ0 79 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 FAM236BA0A1B0GV22 79 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 CCL25O15444 150 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 BTG2P78543 158 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 ZCCHC23Q6ZST2 131 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 ARL17AQ8IVW1 177 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 SDF2Q99470 211 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 LSM2Q9Y333 95 aaKnown RBP1.61□□□□□ -2.15
HERC4-208ENST00000463478 NOP16Q9Y3C1 178 aaKnown RBP1.61□□□□□ -2.15
HERC4-208ENST00000463478 FREM3P0C091 2139 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 MYH10P35580 1976 aa1.61□□□□□ -2.15
HERC4-208ENST00000463478 SONP18583 2426 aaKnown RBP1.6□□□□□ -2.15
HERC4-208ENST00000463478 PEG3Q9GZU2 1588 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 FRYLO94915 3013 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 PTPRGP23470 1445 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 CCDC179H3BU77 68 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 J3QLW9 94 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 DLEU1O43261 78 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 APOC1P02654 83 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 GYPBP06028 91 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 ADCYAP1P18509 176 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 FGF7P21781 194 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 NEDD8Q15843 81 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 SLC25A26Q70HW3 274 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 NDUFA11Q86Y39 141 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 KCNRGQ8N5I3 272 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 RERGLQ9H628 205 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 MYLKQ15746 1914 aa1.6□□□□□ -2.15
HERC4-208ENST00000463478 LAMB2P55268 1798 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 RP1P56715 2156 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 WDR97A6NE52 1622 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 A0A0G2JMM0 328 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 FAM25AB3EWG3 89 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 FAM25CB3EWG5 89 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 FAM25GB3EWG6 89 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 IGF2P01344 180 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 PLPP5Q8NEB5 264 aa1.59□□□□□ -2.15
HERC4-208ENST00000463478 DYNLRB2Q8TF09 96 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms