RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PFN1P07737 140 aaKnown RBP6.21□□□□□ -1.42
BRCA1-207ENST00000461798 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
BRCA1-207ENST00000461798 SMUG1Q53HV7 270 aa6.21□□□□□ -1.42
BRCA1-207ENST00000461798 RPL7L1Q6DKI1 246 aaKnown RBP6.21□□□□□ -1.42
BRCA1-207ENST00000461798 CYB561D1Q8N8Q1 229 aa6.21□□□□□ -1.42
BRCA1-207ENST00000461798 C9orf85Q96MD7 179 aa6.21□□□□□ -1.42
BRCA1-207ENST00000461798 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
BRCA1-207ENST00000461798 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 A6NJY4 79 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 G3V3Q6 166 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 EVI2AP22794 236 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 ZNF726P1Q15940 193 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 CFAP126Q5VTH2 177 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 DPPA3Q6W0C5 159 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 PRNTQ86SH4 94 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 WFDC10BQ8IUB3 73 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 Q8N1X5 172 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 OR2T35Q8NGX2 323 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 NKX6-2Q9C056 277 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-207ENST00000461798 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
BRCA1-207ENST00000461798 A0A087WTM6 91 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 LOC100131303A0A0U1RQF7 123 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 EREGO14944 169 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
BRCA1-207ENST00000461798 ERVFC1-1P60608 527 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 ZFP69Q49AA0 526 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 COX8CQ7Z4L0 72 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 SLC25A29Q8N8R3 303 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 MSRB1Q9NZV6 116 aa6.19□□□□□ -1.42
BRCA1-207ENST00000461798 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
BRCA1-207ENST00000461798 FXYD6-FXYD2A0A087WZ82 144 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 IGKV3D-20A0A0C4DH25 116 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 FABP5P3A8MUU1 101 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 PPT1P50897 306 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 RHOHQ15669 191 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 LINC01556Q5JQF7 62 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 HIST1H2BAQ96A08 127 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 PRADC1Q9BSG0 188 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
BRCA1-207ENST00000461798 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 IGHV3-38A0A0C4DH36 116 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 FAM74A7A6NL05 159 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 PEX7O00628 323 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 IFNA7P01567 189 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 CRYGDP07320 174 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 MGST1P10620 155 aaKnown RBP6.17□□□□□ -1.42
BRCA1-207ENST00000461798 FHITP49789 147 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 CRIP1P50238 77 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 RGS21Q2M5E4 152 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 ZNF506Q5JVG8 444 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 DNLZQ5SXM8 178 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 AKR1C8PQ5T2L2 129 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 ZFP30Q9Y2G7 519 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
BRCA1-207ENST00000461798 TRAV8-6A0A0B4J262 113 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 A8MWV9 139 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 IBA57-AS1B1ANH7 110 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 LELP1Q5T871 98 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 TCEAL7Q9BRU2 100 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 IL36BQ9NZH7 164 aa6.16□□□□□ -1.42
BRCA1-207ENST00000461798 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 KRBOX1C9JBD0 128 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 ARPC5O15511 151 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 S100A4P26447 101 aaKnown RBP6.15□□□□□ -1.42
BRCA1-207ENST00000461798 FGF8P55075 233 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-207ENST00000461798 UBE2G2P60604 165 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 UFSP1Q6NVU6 142 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 Q6ZSN1 163 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 Q86TA4 180 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 ATP6V0E2Q8NHE4 81 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 GTSF1LQ9H1H1 148 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 PARLQ9H300 379 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 SCRT2Q9NQ03 307 aa6.15□□□□□ -1.42
BRCA1-207ENST00000461798 MAP1LC3B2A6NCE7 125 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 HMSDA8MTL9 139 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 LINC00694P0DN24 101 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 ASIPP42127 132 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 XGP55808 180 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 ZNF674Q2M3X9 581 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 KCNRGQ8N5I3 272 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 STOML3Q8TAV4 291 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 ZC2HC1AQ96GY0 325 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 MAP1LC3BQ9GZQ8 125 aa6.14□□□□□ -1.43
BRCA1-207ENST00000461798 B4DEV8 164 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 SH2D1AO60880 128 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms