RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 NXPH4O95158 308 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 FAM159AQ6UWV7 190 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 AGRNO00468 2067 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 MUC4Q99102 2169 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 FCER1GP30273 86 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 OR1N2Q8NGR9 330 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 FOXC2Q99958 501 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 PMCHL2Q9BQD1 86 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
PTPRN-210ENST00000460801 DPF1Q92782 380 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 IFI27L1Q96BM0 104 aa10.37□□□□□ -0.75
PTPRN-210ENST00000460801 ACANP16112 2415 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 CD5LO43866 347 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
PTPRN-210ENST00000460801 TSPOP30536 169 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 LGALS9BQ3B8N2 356 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 FOXI2Q6ZQN5 318 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
PTPRN-210ENST00000460801 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-210ENST00000460801 DUX3Q96PT4 197 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 CDKN1BP46527 198 aa10.35□□□□□ -0.75
PTPRN-210ENST00000460801 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
PTPRN-210ENST00000460801 TRAV2A0A0B4J234 112 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 AMTNQ6UX39 209 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 DLX4Q92988 240 aaPredicted RBP10.34□□□□□ -0.75
PTPRN-210ENST00000460801 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 CD7P09564 240 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
PTPRN-210ENST00000460801 TMEM158Q8WZ71 300 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 RASL10AQ92737 203 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 GOLT1BQ9Y3E0 138 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
PTPRN-210ENST00000460801 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 YAE1D1Q9NRH1 226 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 AKAP9Q99996 3911 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 LINC00315P59091 139 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 LAGE3Q14657 143 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
PTPRN-210ENST00000460801 NF1P21359 2839 aa10.32□□□□□ -0.76
PTPRN-210ENST00000460801 IGHV3-16A0A0C4DH30 117 aa10.32□□□□□ -0.76
PTPRN-210ENST00000460801 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
PTPRN-210ENST00000460801 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
PTPRN-210ENST00000460801 A8MTW9 85 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
PTPRN-210ENST00000460801 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 C18orf15Q96N68 181 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 TCAPO15273 167 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 MGPP08493 103 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 DEFB131AP59861 70 aa10.31□□□□□ -0.76
PTPRN-210ENST00000460801 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 BATFQ16520 125 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 SLC25A34Q6PIV7 304 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 Q8N1Y9 231 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
PTPRN-210ENST00000460801 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 PPP1R17O96001 155 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 RAX2Q96IS3 184 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
PTPRN-210ENST00000460801 MTORP42345 2549 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 H3BMM0 161 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 JPT2Q9H910 190 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 K7EMI3 77 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
PTPRN-210ENST00000460801 FHL3Q13643 280 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 DYNLRB2Q8TF09 96 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
PTPRN-210ENST00000460801 ATP5LO75964 103 aa10.28□□□□□ -0.76
PTPRN-210ENST00000460801 COX8AP10176 69 aa10.28□□□□□ -0.76
PTPRN-210ENST00000460801 ODF1Q14990 250 aa10.28□□□□□ -0.76
PTPRN-210ENST00000460801 COL5A1-AS1Q5SY13 56 aa10.28□□□□□ -0.76
PTPRN-210ENST00000460801 ZMAT4Q9H898 229 aa10.28□□□□□ -0.76
PTPRN-210ENST00000460801 ANK3Q12955 4377 aaKnown RBP10.28□□□□□ -0.76
PTPRN-210ENST00000460801 CD28P10747 220 aa10.27□□□□□ -0.76
PTPRN-210ENST00000460801 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.76
PTPRN-210ENST00000460801 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.76
PTPRN-210ENST00000460801 PRSS1P07477 247 aa10.27□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms