RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
NELFCD-201ENST00000460601 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
NELFCD-201ENST00000460601 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
NELFCD-201ENST00000460601 TMEM136Q6ZRR5 245 aa12.32□□□□□ -0.44
NELFCD-201ENST00000460601 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
NELFCD-201ENST00000460601 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
NELFCD-201ENST00000460601 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 GIG44P09565 113 aaPredicted RBP12.31□□□□□ -0.44
NELFCD-201ENST00000460601 CTRLP40313 264 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 Q8N1Y9 231 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 WIPF1O43516 503 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 NTF3P20783 257 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 HBBP68871 147 aa12.31□□□□□ -0.44
NELFCD-201ENST00000460601 AMBPP02760 352 aa12.3□□□□□ -0.44
NELFCD-201ENST00000460601 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
NELFCD-201ENST00000460601 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
NELFCD-201ENST00000460601 SLAQ13239 276 aa12.3□□□□□ -0.44
NELFCD-201ENST00000460601 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 TCAPO15273 167 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 KRTAP10-11P60412 298 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 NUTF2P61970 127 aaKnown RBP12.29□□□□□ -0.44
NELFCD-201ENST00000460601 KIAA1644Q3SXP7 199 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 ZNF664Q8N3J9 261 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 S100A4P26447 101 aaKnown RBP12.29□□□□□ -0.44
NELFCD-201ENST00000460601 ASIPP42127 132 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
NELFCD-201ENST00000460601 MRPL18Q9H0U6 180 aaKnown RBP12.29□□□□□ -0.44
NELFCD-201ENST00000460601 IGHV1OR15-1A0A075B7D0 117 aa12.28□□□□□ -0.44
NELFCD-201ENST00000460601 TWIST1Q15672 202 aa12.28□□□□□ -0.44
NELFCD-201ENST00000460601 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
NELFCD-201ENST00000460601 G3V4G9 280 aa12.28□□□□□ -0.44
NELFCD-201ENST00000460601 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
NELFCD-201ENST00000460601 MUC4Q99102 2169 aa12.27□□□□□ -0.44
NELFCD-201ENST00000460601 INSP01308 110 aa12.27□□□□□ -0.45
NELFCD-201ENST00000460601 CBY3A6NI87 242 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 M0R381 172 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 SNAI2O43623 268 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 BORCS7Q96B45 105 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 LINC01587Q99440 93 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 IGHV3-16A0A0C4DH30 117 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 OR5AL1P0C617 328 aa12.26□□□□□ -0.45
NELFCD-201ENST00000460601 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 F2Z2F3 143 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 RIGQ13278 110 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 WDR73Q6P4I2 378 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 HLA-DQA1P01909 254 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
NELFCD-201ENST00000460601 AZU1P20160 251 aa12.24□□□□□ -0.45
NELFCD-201ENST00000460601 TMEM18Q96B42 140 aa12.24□□□□□ -0.45
NELFCD-201ENST00000460601 SCRT2Q9NQ03 307 aa12.24□□□□□ -0.45
NELFCD-201ENST00000460601 PHLDA3Q9Y5J5 127 aa12.24□□□□□ -0.45
NELFCD-201ENST00000460601 APCSP02743 223 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 EVI2AP22794 236 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 IQCJQ1A5X6 159 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 MT-ND6P03923 174 aa12.23□□□□□ -0.45
NELFCD-201ENST00000460601 RAB4AP20338 218 aa12.22□□□□□ -0.45
NELFCD-201ENST00000460601 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
NELFCD-201ENST00000460601 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
NELFCD-201ENST00000460601 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
NELFCD-201ENST00000460601 JPT2Q9H910 190 aa12.22□□□□□ -0.45
NELFCD-201ENST00000460601 NBEAL1Q6ZS30 2694 aa12.21□□□□□ -0.45
NELFCD-201ENST00000460601 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
NELFCD-201ENST00000460601 CSTL1Q9H114 145 aa12.21□□□□□ -0.45
NELFCD-201ENST00000460601 EREGO14944 169 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 COX19Q49B96 90 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 MGAM2Q2M2H8 2515 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 M0R143 59 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 SRIP30626 198 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 C20orf144Q9BQM9 153 aa12.2□□□□□ -0.46
NELFCD-201ENST00000460601 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 A0A1B0GW15 77 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 MED14OSP0DP75 135 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 MORN3Q6PF18 240 aaPredicted RBP12.19□□□□□ -0.46
NELFCD-201ENST00000460601 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
NELFCD-201ENST00000460601 PRB2P02812 416 aaPredicted RBP12.19□□□□□ -0.46
NELFCD-201ENST00000460601 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 SNHG12Q9BXW3 62 aa12.19□□□□□ -0.46
NELFCD-201ENST00000460601 KIR2DL5BA0A0G2JN68 375 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 KIR2DL5BA0A0G2JPC4 375 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 FAM104BQ5XKR9 115 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 KIR2DL5AQ8N109 375 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
NELFCD-201ENST00000460601 RNF185Q96GF1 192 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 C1QTNF4Q9BXJ3 329 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms