RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SPANXN1Q5VSR9 72 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 CLEC19AQ6UXS0 136 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 TEX29Q8N6K0 151 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 OR10J6PQ8NGY7 276 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 FAM19A4Q96LR4 140 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 JMJD8Q96S16 334 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 ITPR3Q14573 2671 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 MUC4Q99102 2169 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 IGHV4OR15-8A0A075B7B6 117 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 A0A087WW49 117 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 SOCS3O14543 225 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 TRGV3P03979 118 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 SUMO2P61956 95 aaKnown RBP4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 RNF151Q2KHN1 245 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 IGFL4Q6B9Z1 124 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 RNF182Q8N6D2 247 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 ZFAND2AQ8N6M9 145 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 C16orf92Q96LL3 132 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 C18orf15Q96N68 181 aa4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 MRPL35Q9NZE8 188 aaKnown RBP4.66□□□□□ -1.66
UBQLN4-202ENST00000459954 TRBV7-3A0A075B6L6 115 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 A0A1W2PPR1 153 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 K7EMT4 169 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 GAS8-AS1O95177 125 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHG2P01859 326 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 SCGB1A1P11684 91 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 GATA1P15976 413 aaPredicted RBP4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 GCSHP23434 173 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 ARL3P36405 182 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 ASIPP42127 132 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 FXYD2P54710 66 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 FXYD7P58549 80 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 FOXI2Q6ZQN5 318 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 GTSCR1Q86UQ5 136 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 NEXN-AS1Q8NBZ9 246 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 CELSR1Q9NYQ6 3014 aa4.65□□□□□ -1.67
UBQLN4-202ENST00000459954 CSMD2Q7Z408 3487 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 MYMXA0A1B0GTQ4 84 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 OR11H12B2RN74 326 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 IGLL5B9A064 214 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 G3V318 75 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 J3QR89 54 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV1-69P01742 117 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 GATA3P23771 443 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 PPIFP30405 207 aaKnown RBP4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 KRTAP10-9P60411 292 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 SCGB2A2Q13296 93 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 C12orf74Q32Q52 190 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 GPHB5Q86YW7 130 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 OR11H1Q8NG94 326 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 OR11H2Q8NH07 326 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 RASL10AQ92737 203 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 SCGB3A1Q96QR1 104 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 UFC1Q9Y3C8 167 aa4.64□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3-35A0A0C4DH35 117 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 TRBV6-5A0A0K0K1A5 114 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 TMEM89A2RUT3 159 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 LINC01548A6NM66 108 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 KLLNB2CW77 178 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 H3BVH4 76 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV4-39P01824 125 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 S100A4P26447 101 aaKnown RBP4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 RRN3P1Q2M238 152 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 Q5PR19 223 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 WFDC3Q8IUB2 231 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 MAPKAPK5-AS1Q8N8E1 139 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 RNF152Q8N8N0 203 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 C10orf105Q8TEF2 133 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 RAB37Q96AX2 223 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 ZNF479Q96JC4 524 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 C20orf173Q96LM9 149 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 PHLDA3Q9Y5J5 127 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 KIF25-AS1Q9Y6Z4 181 aa4.63□□□□□ -1.67
UBQLN4-202ENST00000459954 HIVEP1P15822 2718 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 NIPBLQ6KC79 2804 aaeCLIP4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3OR16-8A0A075B7F1 116 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 A6NDX4 124 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 RNF223E7ERA6 249 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 SAP30O75446 220 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 IGLV1-40P01703 118 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 ID1P41134 155 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 POLR2KP53803 58 aaKnown RBP4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 RIPPLY3P57055 190 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 HERVK_113P61574 105 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 PRR9Q5T870 116 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 LYRM7Q5U5X0 104 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 LCNL1Q6ZST4 164 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 ATP6V0E2Q8NHE4 81 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 BAALCQ8WXS3 180 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 HIST1H4GQ99525 98 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms