RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 UBE2D2P62837 147 aa9.54□□□□□ -0.88
SF3B4-202ENST00000457312 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
SF3B4-202ENST00000457312 RABL2BQ9UNT1 228 aa9.54□□□□□ -0.88
SF3B4-202ENST00000457312 DISC1C4P0D8 188 aa9.53□□□□□ -0.88
SF3B4-202ENST00000457312 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
SF3B4-202ENST00000457312 RBX1P62877 108 aa9.53□□□□□ -0.88
SF3B4-202ENST00000457312 PHYHIPLQ96FC7 376 aa9.53□□□□□ -0.88
SF3B4-202ENST00000457312 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
SF3B4-202ENST00000457312 PTTG1O95997 202 aa9.52□□□□□ -0.89
SF3B4-202ENST00000457312 CAMLGP49069 296 aa9.52□□□□□ -0.89
SF3B4-202ENST00000457312 PKIAP61925 76 aa9.52□□□□□ -0.89
SF3B4-202ENST00000457312 ARL16Q0P5N6 197 aa9.52□□□□□ -0.89
SF3B4-202ENST00000457312 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
SF3B4-202ENST00000457312 FCGBPQ9Y6R7 5405 aaPredicted RBP9.51□□□□□ -0.89
SF3B4-202ENST00000457312 PIGBOS1A0A0B4J2F0 54 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 HPGDSO60760 199 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 REG3AQ06141 175 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 TMED6Q8WW62 240 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
SF3B4-202ENST00000457312 SSSCA1O60232 199 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 CSN1S1P47710 185 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 MT1HP80294 61 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 NRARPQ7Z6K4 114 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 TVP23CQ96ET8 276 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 PRRT1Q99946 306 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
SF3B4-202ENST00000457312 USH2AO75445 5202 aa9.49□□□□□ -0.89
SF3B4-202ENST00000457312 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
SF3B4-202ENST00000457312 LGALSLQ3ZCW2 172 aaPredicted RBP9.49□□□□□ -0.89
SF3B4-202ENST00000457312 ARL6IP6Q8N6S5 226 aa9.49□□□□□ -0.89
SF3B4-202ENST00000457312 GZMBP10144 247 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
SF3B4-202ENST00000457312 RPL36AP83881 106 aaKnown RBP9.48□□□□□ -0.89
SF3B4-202ENST00000457312 ID3Q02535 119 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 DYNC2LI1Q8TCX1 351 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 RPL36ALQ969Q0 106 aaKnown RBP9.48□□□□□ -0.89
SF3B4-202ENST00000457312 SMIM8Q96KF7 97 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
SF3B4-202ENST00000457312 TRBV7-3A0A075B6L6 115 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 TRAV8-4A0A0B4J246 113 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 RHODO00212 210 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 P01737 135 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 RAB5CP51148 216 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 CYCSP99999 105 aaKnown RBP9.47□□□□□ -0.89
SF3B4-202ENST00000457312 GGACTQ9BVM4 153 aa9.47□□□□□ -0.89
SF3B4-202ENST00000457312 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
SF3B4-202ENST00000457312 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
SF3B4-202ENST00000457312 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
SF3B4-202ENST00000457312 AKAIN1P0CW23 69 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 S100A10P60903 97 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 GAGE6Q13070 117 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 CLVS1Q8IUQ0 354 aaPredicted RBP9.45□□□□□ -0.9
SF3B4-202ENST00000457312 CNBD2Q96M20 576 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
SF3B4-202ENST00000457312 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 FAM25AB3EWG3 89 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 FAM25CB3EWG5 89 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 FAM25GB3EWG6 89 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 AMTP48728 403 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 SSBP1Q04837 148 aaKnown RBP9.44□□□□□ -0.9
SF3B4-202ENST00000457312 GCSAMLQ5JQS6 135 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
SF3B4-202ENST00000457312 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
SF3B4-202ENST00000457312 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
SF3B4-202ENST00000457312 SPCS2Q15005 226 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 RABL2AQ9UBK7 228 aaPredicted RBP9.43□□□□□ -0.9
SF3B4-202ENST00000457312 EXTL2Q9UBQ6 330 aa9.43□□□□□ -0.9
SF3B4-202ENST00000457312 CARHSP1Q9Y2V2 147 aaKnown RBP9.43□□□□□ -0.9
SF3B4-202ENST00000457312 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
SF3B4-202ENST00000457312 TSC22D2O75157 780 aa9.42□□□□□ -0.9
SF3B4-202ENST00000457312 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
SF3B4-202ENST00000457312 MIR17HGQ75NE6 70 aa9.42□□□□□ -0.9
SF3B4-202ENST00000457312 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
SF3B4-202ENST00000457312 BCL7BQ9BQE9 202 aa9.42□□□□□ -0.9
SF3B4-202ENST00000457312 WDR83OSQ9Y284 106 aa9.42□□□□□ -0.9
SF3B4-202ENST00000457312 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
SF3B4-202ENST00000457312 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
SF3B4-202ENST00000457312 RAB2AP61019 212 aa9.41□□□□□ -0.9
SF3B4-202ENST00000457312 LSM3P62310 102 aaKnown RBP9.41□□□□□ -0.9
SF3B4-202ENST00000457312 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
SF3B4-202ENST00000457312 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
SF3B4-202ENST00000457312 MACF1Q9UPN3 7388 aaKnown RBP9.41□□□□□ -0.9
SF3B4-202ENST00000457312 KRTAP19-2Q3LHN2 52 aa9.4□□□□□ -0.9
SF3B4-202ENST00000457312 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.9
SF3B4-202ENST00000457312 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
SF3B4-202ENST00000457312 SCP2D1Q9UJQ7 156 aa9.4□□□□□ -0.9
SF3B4-202ENST00000457312 TMEM128Q5BJH2 165 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms