RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DEFB1P60022 68 aa7.83□□□□□ -1.16
CLIP4-208ENST00000456385 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
CLIP4-208ENST00000456385 IGFL3Q6UXB1 125 aa7.83□□□□□ -1.16
CLIP4-208ENST00000456385 CLEC19AQ6UXS0 136 aa7.83□□□□□ -1.16
CLIP4-208ENST00000456385 ABCA4P78363 2273 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 TRAV4A0A0B4J268 109 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 C9JAW5 83 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 H7C2G1 150 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 SLC25A20O43772 301 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 SCGB2A1O75556 95 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 ECSCRQ19T08 205 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 C9orf47Q6ZRZ4 202 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 DEFB124Q8NES8 71 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 MED13LQ71F56 2210 aa7.82□□□□□ -1.16
CLIP4-208ENST00000456385 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
CLIP4-208ENST00000456385 S100A4P26447 101 aaKnown RBP7.81□□□□□ -1.16
CLIP4-208ENST00000456385 LY6G5BQ8NDX9 201 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 VCX2Q9H322 139 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 DPH3P1Q9H4G8 78 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 ARL3P36405 182 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
CLIP4-208ENST00000456385 GPHB5Q86YW7 130 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 C20orf173Q96LM9 149 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 PRO1854Q9UHT4 67 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 PHLDA3Q9Y5J5 127 aa7.81□□□□□ -1.16
CLIP4-208ENST00000456385 ODF3BA8MYP8 253 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 TMEM262E9PQX1 116 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 ELANEP08246 267 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 SRD5A1P18405 259 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 TMEM170BQ5T4T1 132 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 B9A039 149 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 RHODO00212 210 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 GNRH2O43555 120 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 AMELXQ99217 191 aa7.8□□□□□ -1.16
CLIP4-208ENST00000456385 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
CLIP4-208ENST00000456385 A4D1N5 150 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 G3V318 75 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 NDUFV3P56181 108 aaKnown RBP7.79□□□□□ -1.16
CLIP4-208ENST00000456385 Q8N6K4 173 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 C16orf92Q96LL3 132 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 CELSR1Q9NYQ6 3014 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 HERVK_113P61574 105 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 GAGE2EQ4V326 116 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 VMO1Q7Z5L0 202 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 ZFAND2AQ8N6M9 145 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 GAGE2DQ9UEU5 116 aa7.79□□□□□ -1.16
CLIP4-208ENST00000456385 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 SNCGO76070 127 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 Q8N9W7 124 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
CLIP4-208ENST00000456385 METTL26Q96S19 204 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 ACACAQ13085 2346 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 ATP6V0E1O15342 81 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 ASIPP42127 132 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 PMVKQ15126 192 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 Q8N1Y9 231 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 JPT2Q9H910 190 aa7.78□□□□□ -1.16
CLIP4-208ENST00000456385 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 IGHV3-64A0A075B6Q5 118 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 J3QQQ9 107 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 IGHV3-33P01772 117 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 LINC01560Q8TB33 94 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 IGHV4-39P01824 125 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 CD3EP07766 207 aa7.77□□□□□ -1.17
CLIP4-208ENST00000456385 RNASE3P12724 160 aaKnown RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 RNASE4P34096 147 aaKnown RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 FAM110DQ8TAY7 271 aaPredicted RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 BEX4Q9NWD9 120 aaPredicted RBP7.77□□□□□ -1.17
CLIP4-208ENST00000456385 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
CLIP4-208ENST00000456385 TRAV21A0A0B4J279 112 aa7.76□□□□□ -1.17
CLIP4-208ENST00000456385 F6UB75 175 aa7.76□□□□□ -1.17
CLIP4-208ENST00000456385 C1orf122Q6ZSJ8 110 aa7.76□□□□□ -1.17
CLIP4-208ENST00000456385 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE12JA6NER3 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE7O76087 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 LINC00315P59091 139 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 GAGE4Q13068 117 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 TTC32Q5I0X7 151 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 SHISA2Q6UWI4 295 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 ITLN2Q8WWU7 325 aaPredicted RBP7.75□□□□□ -1.17
CLIP4-208ENST00000456385 MUC4Q99102 2169 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 A0A087WWL8 130 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 IFITM1P13164 125 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms