RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 LEPP41159 167 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 MYOZ3Q8TDC0 251 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 TSPOP30536 169 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 Q6ZN92 141 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 hDV102S1A0JD36 115 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 HBDP02042 147 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 OR2K2Q8NGT1 345 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.77
CLK3-203ENST00000454830 CNFNQ9BYD5 112 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 Q8N2B8 174 aa10.21□□□□□ -0.77
CLK3-203ENST00000454830 DUSP14O95147 198 aaKnown RBP10.21□□□□□ -0.78
CLK3-203ENST00000454830 CDKN1BP46527 198 aa10.21□□□□□ -0.78
CLK3-203ENST00000454830 PDZD2O15018 2839 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 A0A087WWL8 130 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 TCAPO15273 167 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 SCGB2A2Q13296 93 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 MIEN1Q9BRT3 115 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 ADAMTSL5Q6ZMM2 481 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 APRG1Q8IVJ8 170 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 AP1S3Q96PC3 154 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 U3KQK5 164 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 HNRNPA3P51991 378 aaKnown RBP10.2□□□□□ -0.78
CLK3-203ENST00000454830 RNF152Q8N8N0 203 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 C20orf144Q9BQM9 153 aa10.2□□□□□ -0.78
CLK3-203ENST00000454830 PRSS1P07477 247 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 CTAG1AP78358 180 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 ZNF747Q9BV97 191 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 JPT2Q9H910 190 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 CBY3A6NI87 242 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 CCL24O00175 119 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 SNAI2O43623 268 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 DPH3P1Q9H4G8 78 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 KRTAP1-1Q07627 177 aa10.19□□□□□ -0.78
CLK3-203ENST00000454830 CD300EQ496F6 205 aaPredicted RBP10.19□□□□□ -0.78
CLK3-203ENST00000454830 NXT2Q9NPJ8 142 aaKnown RBP10.19□□□□□ -0.78
CLK3-203ENST00000454830 KLLNB2CW77 178 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 EREGO14944 169 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
CLK3-203ENST00000454830 IGLL1P15814 213 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 FOXI2Q6ZQN5 318 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 RAX2Q96IS3 184 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 LINC01006Q8NI28 216 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 TMEM158Q8WZ71 300 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 UQCR10Q9UDW1 63 aa10.18□□□□□ -0.78
CLK3-203ENST00000454830 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
CLK3-203ENST00000454830 M0R143 59 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 C2CD3Q4AC94 2353 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
CLK3-203ENST00000454830 TMEM208Q9BTX3 173 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 NUDT3O95989 172 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 Q8N1Y9 231 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 FAM19A4Q96LR4 140 aa10.17□□□□□ -0.78
CLK3-203ENST00000454830 NACAE9PAV3 2078 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 TRBV7-9A0A0J9YWB2 115 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 ZNF56Q15929 161 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 LAMTOR2Q9Y2Q5 125 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 GOLT1BQ9Y3E0 138 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 A0A1B0GV90 55 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 SAP30O75446 220 aa10.16□□□□□ -0.78
CLK3-203ENST00000454830 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
CLK3-203ENST00000454830 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
CLK3-203ENST00000454830 PRM2P04554 102 aa10.15□□□□□ -0.78
CLK3-203ENST00000454830 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
CLK3-203ENST00000454830 TP73-AS1Q9UF72 201 aa10.15□□□□□ -0.78
CLK3-203ENST00000454830 A0A096LNJ9 63 aa10.15□□□□□ -0.79
CLK3-203ENST00000454830 Q8N8P6 123 aa10.15□□□□□ -0.79
CLK3-203ENST00000454830 SNHG12Q9BXW3 62 aa10.15□□□□□ -0.79
CLK3-203ENST00000454830 MUC4Q99102 2169 aa10.15□□□□□ -0.79
CLK3-203ENST00000454830 LY6G6DO95868 133 aa10.14□□□□□ -0.79
CLK3-203ENST00000454830 SYT8Q8NBV8 401 aa10.14□□□□□ -0.79
CLK3-203ENST00000454830 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
CLK3-203ENST00000454830 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
CLK3-203ENST00000454830 RNASE1P07998 156 aaKnown RBP10.14□□□□□ -0.79
CLK3-203ENST00000454830 LAGE3Q14657 143 aa10.14□□□□□ -0.79
CLK3-203ENST00000454830 LINC01587Q99440 93 aa10.14□□□□□ -0.79
CLK3-203ENST00000454830 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 FCER1GP30273 86 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 MAP6D1Q9H9H5 199 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 XCL2Q9UBD3 114 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
CLK3-203ENST00000454830 CUBNO60494 3623 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 NRACQ8N912 160 aa10.13□□□□□ -0.79
CLK3-203ENST00000454830 H3BMM0 161 aa10.12□□□□□ -0.79
CLK3-203ENST00000454830 STHQ8IWL8 128 aa10.12□□□□□ -0.79
CLK3-203ENST00000454830 HINT1P49773 126 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms