RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CSN1S1P47710 185 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ZNF80P51504 273 aaPredicted RBP3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CTAG1AP78358 180 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GAGE1Q13065 139 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GAGE4Q13068 117 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GAGE5Q13069 117 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GAGE13Q4V321 117 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FFAR4Q5NUL3 377 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ALKAL2Q6UX46 152 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OR2T35Q8NGX2 323 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C2orf50Q96LR7 162 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SDF2L1Q9HCN8 221 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 KRBOX1C9JBD0 128 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 APOC3P02656 99 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RAB2AP61019 212 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FLI1Q01543 452 aaPredicted RBP3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 IL15RAQ13261 267 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ODF1Q14990 250 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RHOHQ15669 191 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 LELP1Q5T871 98 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 LINC00518Q8N0U6 118 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ASB13Q8WXK3 278 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SPXQ9BT56 116 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 WDR61Q9GZS3 305 aaKnown RBP3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 JPT2Q9H910 190 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TREM1Q9NP99 234 aa3.93□□□□□ -1.78
HLA-DPA3-207ENST00000454398 IGKV2D-24A0A075B6R9 120 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TMEM238LA0A1B0GVL6 79 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RBAKDNA6NC62 111 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RBFOX3A6NFN3 312 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 K7EP13 123 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ARPC5O15511 151 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GIPP09681 153 aaPredicted RBP3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 LINC00694P0DN24 101 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TIRAPP58753 221 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 LAGE3Q14657 143 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TDRG1Q3Y452 100 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 KHDC3LQ587J8 217 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TMUB2Q71RG4 321 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C14orf178Q8N769 122 aaPredicted RBP3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SYT8Q8NBV8 401 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CMTM2Q8TAZ6 248 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CIRBP-AS1Q8TBR5 109 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ATP5SQ99766 215 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PRADC1Q9BSG0 188 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NMES1Q9C002 83 aa3.92□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TRAV21A0A0B4J279 112 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TRBV7-9A0A0J9YWB2 115 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PGPA6NDG6 321 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 A6NJY4 79 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FAM74A7A6NL05 159 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 G3V3Q6 166 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RS1O15537 224 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GCGP01275 180 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ARL14EPLP0DKL9 152 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RNASE3P12724 160 aaKnown RBP3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FAM74A3Q4VXF1 159 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SERTAD4-AS1Q5TG53 156 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ATRAIDQ6UW56 229 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 UBE2WQ96B02 151 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C9orf85Q96MD7 179 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C12orf57Q99622 126 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 CHAC1Q9BUX1 264 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SAMD10Q9BYL1 202 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NKX6-2Q9C056 277 aaPredicted RBP3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GTSF1LQ9H1H1 148 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PARLQ9H300 379 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OTORQ9NRC9 128 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 KCNIP2Q9NS61 270 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 MED9Q9NWA0 146 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 KLK12Q9UKR0 248 aa3.91□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TRBV6-4A0A1B0GX49 114 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 GGTLC3B5MD39 225 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 H3BVH4 76 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PANO1I0J062 215 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PFN1P07737 140 aaKnown RBP3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 H2BFSP57053 126 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RPL37AP61513 92 aaKnown RBP3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ATP6V1FQ16864 119 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 FAM74A4Q5TZK3 123 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CLPSL2Q6UWE3 100 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SH2D6Q7Z4S9 175 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PRNTQ86SH4 94 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TM2D2Q9BX73 214 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 WFDC1Q9HC57 220 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 BIN3Q9NQY0 253 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MBD2Q9UBB5 411 aa3.9□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A0A087WWL8 130 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 KANTRA0A1W2PQU2 76 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 C17orf112F2Z3M2 114 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms