RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 HIST1H2BCP62807 126 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 TWIST1Q15672 202 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 HIST2H2BEQ16778 126 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 SPANXN1Q5VSR9 72 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 HIST1H2BHQ93079 126 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 HIST1H2BNQ99877 126 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 HIST1H2BMQ99879 126 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 PHLDA3Q9Y5J5 127 aa14.36□□□□□ -0.11
HIGD1A-204ENST00000452906 FXYD7P58549 80 aa14.35□□□□□ -0.11
HIGD1A-204ENST00000452906 DEFB121Q5J5C9 76 aa14.35□□□□□ -0.11
HIGD1A-204ENST00000452906 ZNF575Q86XF7 245 aa14.35□□□□□ -0.11
HIGD1A-204ENST00000452906 NTF3P20783 257 aa14.34□□□□□ -0.11
HIGD1A-204ENST00000452906 Q6ZQT7 251 aa14.34□□□□□ -0.11
HIGD1A-204ENST00000452906 TMEM191AQ9H0A3 160 aa14.34□□□□□ -0.11
HIGD1A-204ENST00000452906 SCRT2Q9NQ03 307 aa14.34□□□□□ -0.11
HIGD1A-204ENST00000452906 CBY3A6NI87 242 aa14.33□□□□□ -0.12
HIGD1A-204ENST00000452906 TMEM208Q9BTX3 173 aa14.33□□□□□ -0.12
HIGD1A-204ENST00000452906 GOLT1BQ9Y3E0 138 aa14.33□□□□□ -0.12
HIGD1A-204ENST00000452906 FRMD6-AS1P0C7T7 363 aa14.32□□□□□ -0.12
HIGD1A-204ENST00000452906 SYT8Q8NBV8 401 aa14.32□□□□□ -0.12
HIGD1A-204ENST00000452906 B9D2Q9BPU9 175 aa14.32□□□□□ -0.12
HIGD1A-204ENST00000452906 IGHV3-16A0A0C4DH30 117 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 GNRH2O43555 120 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 SLAQ13239 276 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 Q8N1Y9 231 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 OR10AG1Q8NH19 301 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 LINC01587Q99440 93 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 XCL2Q9UBD3 114 aa14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 TIMM8BQ9Y5J9 83 aaPredicted RBP14.31□□□□□ -0.12
HIGD1A-204ENST00000452906 LOC102724200A0A096LPH7 203 aaPredicted RBP14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 NXPH4O95158 308 aa14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 RNASE3P12724 160 aaKnown RBP14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 DMRTA1Q5VZB9 504 aa14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 AP1S3Q96PC3 154 aa14.3□□□□□ -0.12
HIGD1A-204ENST00000452906 NDUFA6P56556 154 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 OR10J3Q5JRS4 329 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 FAM104BQ5XKR9 115 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 DEFB125Q8N687 156 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 WFDC10AQ9H1F0 79 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 TP53TG3Q9ULZ0 132 aa14.29□□□□□ -0.12
HIGD1A-204ENST00000452906 PPBPP02775 128 aa14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 RPL35AP18077 110 aaKnown RBP14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 SRIP30626 198 aa14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 COA6Q5JTJ3 125 aaKnown RBP14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 PIK3CD-AS1Q5SR53 167 aa14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 SPXQ9BT56 116 aa14.28□□□□□ -0.12
HIGD1A-204ENST00000452906 MUC21A0A0G2JKD1 596 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 MUC21A0A140T8X8 626 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 M0R381 172 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 RBMY1A1P0DJD3 496 aaKnown RBP14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 RBMY1CP0DJD4 496 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 Q0VG73 95 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 RBMY1FQ15415 496 aaKnown RBP14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 CSTL1Q9H114 145 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 TENM3Q9P273 2699 aa14.27□□□□□ -0.13
HIGD1A-204ENST00000452906 KIR2DL5BA0A0G2JN68 375 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 KIR2DL5BA0A0G2JPC4 375 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 C5orf52A6NGY3 159 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 APOC4P55056 127 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 SSTP61278 116 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 KIAA1644Q3SXP7 199 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 KIR2DL5AQ8N109 375 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 KIR2DL5BQ8NHK3 375 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 PTH2Q96A98 100 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 ALKBH7Q9BT30 221 aaPredicted RBP14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
HIGD1A-204ENST00000452906 SMIM17P0DL12 118 aa14.25□□□□□ -0.13
HIGD1A-204ENST00000452906 ORMDL3Q8N138 153 aa14.25□□□□□ -0.13
HIGD1A-204ENST00000452906 DPH3P1Q9H4G8 78 aa14.25□□□□□ -0.13
HIGD1A-204ENST00000452906 MSRB1Q9NZV6 116 aa14.25□□□□□ -0.13
HIGD1A-204ENST00000452906 LAMTOR2Q9Y2Q5 125 aa14.25□□□□□ -0.13
HIGD1A-204ENST00000452906 SNRPEP62304 92 aaKnown RBP14.24□□□□□ -0.13
HIGD1A-204ENST00000452906 BAGE3Q86Y29 109 aa14.24□□□□□ -0.13
HIGD1A-204ENST00000452906 C1orf158Q8N1D5 194 aa14.24□□□□□ -0.13
HIGD1A-204ENST00000452906 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
HIGD1A-204ENST00000452906 UBE2CO00762 179 aa14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 HTN1P15515 57 aa14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 HOXA5P20719 270 aa14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 AMN1Q8IY45 258 aa14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 TMEM263Q8WUH6 116 aaKnown RBP14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 MRAP2Q96G30 205 aa14.23□□□□□ -0.13
HIGD1A-204ENST00000452906 M0R2P5 195 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 CKS2P33552 79 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 MRPL51Q4U2R6 128 aaKnown RBP14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 C16orf74Q96GX8 76 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 RCHY1Q96PM5 261 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 U3KQK5 164 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 DNAH9Q9NYC9 4486 aa14.22□□□□□ -0.13
HIGD1A-204ENST00000452906 GIG44P09565 113 aaPredicted RBP14.21□□□□□ -0.13
HIGD1A-204ENST00000452906 RAB4AP20338 218 aa14.21□□□□□ -0.13
HIGD1A-204ENST00000452906 C18orf32Q8TCD1 76 aa14.21□□□□□ -0.13
HIGD1A-204ENST00000452906 WWC2-AS2Q96NR7 200 aa14.21□□□□□ -0.13
HIGD1A-204ENST00000452906 IGHV3OR16-12A0A075B7B8 117 aa14.2□□□□□ -0.14
HIGD1A-204ENST00000452906 PPP1R17O96001 155 aa14.2□□□□□ -0.14
HIGD1A-204ENST00000452906 EVI2AP22794 236 aa14.2□□□□□ -0.14
HIGD1A-204ENST00000452906 S100A2P29034 98 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms