RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 TRAV26-2A0A0B4J265 109 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 A0A0J9YXY3 114 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 UBE2E1P51965 193 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 FAM222AQ5U5X8 452 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 Q5XG85 94 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 HRCT1Q6UXD1 115 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
SMCO1-202ENST00000452776 TMEM200BQ69YZ2 307 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 Q8TAT8 98 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 PYGO1Q9Y3Y4 419 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 MKI67P46013 3256 aaKnown RBP6.36□□□□□ -1.39
SMCO1-202ENST00000452776 CEP290O15078 2479 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 TRGV5A0A0B4J1U4 118 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
SMCO1-202ENST00000452776 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 TP53TG1Q9Y2A0 90 aa6.36□□□□□ -1.39
SMCO1-202ENST00000452776 MBD3L4A6NDZ8 208 aaPredicted RBP6.35□□□□□ -1.39
SMCO1-202ENST00000452776 MBD3L3A6NE82 208 aaPredicted RBP6.35□□□□□ -1.39
SMCO1-202ENST00000452776 MBD3L5A6NJ08 208 aaPredicted RBP6.35□□□□□ -1.39
SMCO1-202ENST00000452776 I3L3M4 83 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 TSPEAR-AS2P59090 65 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 NPC2P61916 151 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 TPSG1Q9NRR2 321 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 CACNA1AO00555 2505 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 KNTC1P50748 2209 aa6.35□□□□□ -1.39
SMCO1-202ENST00000452776 IGLV3-9A0A075B6K5 115 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 TRAV8-3A0A0A6YYJ7 113 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 IGHV1-18A0A0C4DH31 117 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 TINCRA0A1B0GVN0 87 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 SPRY3O43610 288 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 PRSS2P07478 247 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 RHOHQ15669 191 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 MIAQ16674 131 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 Q6JHZ5 121 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 PRIMA1Q86XR5 153 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 DYNAPQ8N1N2 210 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 C14orf178Q8N769 122 aaPredicted RBP6.34□□□□□ -1.39
SMCO1-202ENST00000452776 OVOL2Q9BRP0 275 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 UPK3BQ9BT76 320 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 PCNX2A6NKB5 2137 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 F5P12259 2224 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 TNCP24821 2201 aa6.34□□□□□ -1.39
SMCO1-202ENST00000452776 TRAV12-2A0A075B6T6 113 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 TRAV41A0A0B4J266 112 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 J3QLI3 93 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 NDUFB3O43676 98 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 BCE1O60756 84 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 TSHBP01222 138 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 ZNF883P0CG24 379 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 S100A4P26447 101 aaKnown RBP6.34□□□□□ -1.4
SMCO1-202ENST00000452776 SYNJ2BPP57105 145 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 GFRALQ6UXV0 394 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 Q6ZS52 159 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 DEFB108BQ8NET1 73 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 ZNRD1Q9P1U0 126 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.4
SMCO1-202ENST00000452776 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 MYO7AQ13402 2215 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 TRAV21A0A0B4J279 112 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 COX7A2LO14548 114 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 BUB3O43684 328 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
SMCO1-202ENST00000452776 GPHB5Q86YW7 130 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 SMAD5-AS1Q9Y6J3 95 aa6.33□□□□□ -1.4
SMCO1-202ENST00000452776 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 PFN2P35080 140 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 SEC61GP60059 68 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
SMCO1-202ENST00000452776 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 TMEM61Q8N0U2 210 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 SMCR5Q8TEV8 140 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 LINC00477Q96M19 166 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 V9GYY9 64 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 LY6G6EA0A0G2JKS1 128 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 RS1O15537 224 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 LINC01565O15544 149 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 CLEC2BQ92478 149 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 U3KQA8 63 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 FREM1Q5H8C1 2179 aa6.32□□□□□ -1.4
SMCO1-202ENST00000452776 ASCC3Q8N3C0 2202 aaKnown RBP6.31□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV1-3A0A0C4DH29 117 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 MGPP08493 103 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 BAALC-AS2P0C853 105 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 CCL3L1P16619 93 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 KLRB1Q12918 225 aa6.31□□□□□ -1.4
SMCO1-202ENST00000452776 RPL39LQ96EH5 51 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms