RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RNASE3P12724 160 aaKnown RBP8.46□□□□□ -1.06
CPSF4-208ENST00000452047 SAPCD1Q5SSQ6 148 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 CFAP126Q5VTH2 177 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 PTH2Q96A98 100 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 PEX7O00628 323 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 ARPC5O15511 151 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
CPSF4-208ENST00000452047 TIRAPP58753 221 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 UBE2G2P60604 165 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 ZNF506Q5JVG8 444 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 AKR1C8PQ5T2L2 129 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 SH2D6Q7Z4S9 175 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 Q86TA4 180 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
CPSF4-208ENST00000452047 TRAV9-2A0A087WT02 112 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 IGKV3D-20A0A0C4DH25 116 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 TRBV6-4A0A1B0GX49 114 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 CIDEAO60543 219 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 NFE4Q86UQ8 179 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
CPSF4-208ENST00000452047 A0A0D9SG52 128 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 EVI2AP22794 236 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 PPT1P50897 306 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 ZNF345Q14585 488 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 RHOHQ15669 191 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 TOR2AQ5JU69 321 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 TMUB2Q71RG4 321 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 COMMD7Q86VX2 200 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 HIST1H2BAQ96A08 127 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 NKX6-2Q9C056 277 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-208ENST00000452047 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
CPSF4-208ENST00000452047 IGHV3-73A0A0B4J1V6 119 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 FABP5P3A8MUU1 101 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 CRYGDP07320 174 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 PIK3CD-AS1Q5SR53 167 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 COX8CQ7Z4L0 72 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 SLC51BQ86UW2 128 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 PRADC1Q9BSG0 188 aa8.42□□□□□ -1.06
CPSF4-208ENST00000452047 A0A087WTM6 91 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
CPSF4-208ENST00000452047 FHITP49789 147 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 CRIP1P50238 77 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 KCNRGQ8N5I3 272 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 PARLQ9H300 379 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
CPSF4-208ENST00000452047 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 S100A4P26447 101 aaKnown RBP8.4□□□□□ -1.06
CPSF4-208ENST00000452047 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPSF4-208ENST00000452047 ASIPP42127 132 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 DNLZQ5SXM8 178 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 Q6ZSN1 163 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 Q8N1X5 172 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 FMC1Q96HJ9 113 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 ZFP30Q9Y2G7 519 aa8.4□□□□□ -1.06
CPSF4-208ENST00000452047 TRBV6-1A0A0K0K1D8 114 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 A8MWV9 139 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 B4DEV8 164 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 KRBOX1C9JBD0 128 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 H3BVH4 76 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 EREGO14944 169 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 SH2D1AO60880 128 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 LELP1Q5T871 98 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 UFSP1Q6NVU6 142 aa8.39□□□□□ -1.07
CPSF4-208ENST00000452047 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 M0R036 132 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 LTAP01374 205 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 SEC11BP0C7V7 166 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 UBE2G1P62253 170 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 SAMD10Q9BYL1 202 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 JPT2Q9H910 190 aa8.38□□□□□ -1.07
CPSF4-208ENST00000452047 KANTRA0A1W2PQU2 76 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 BCL2L11O43521 198 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 CST9LP1Q5W188 147 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 MBD3L1Q8WWY6 194 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms