RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZFAND2AQ8N6M9 145 aa12.27□□□□□ -0.45
PRPF40A-204ENST00000450303 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
PRPF40A-204ENST00000450303 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
PRPF40A-204ENST00000450303 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
PRPF40A-204ENST00000450303 RNASE4P34096 147 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-204ENST00000450303 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
PRPF40A-204ENST00000450303 COX8CQ7Z4L0 72 aa12.26□□□□□ -0.45
PRPF40A-204ENST00000450303 GNB1LQ9BYB4 327 aa12.26□□□□□ -0.45
PRPF40A-204ENST00000450303 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 PRR27Q6MZM9 219 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 MLST8Q9BVC4 326 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
PRPF40A-204ENST00000450303 IGHV3OR16-12A0A075B7B8 117 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 FABP5P3A8MUU1 101 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 CT83Q5H943 113 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 GFI1BQ5VTD9 330 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 Q6AWC8 147 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 TMEM256Q8N2U0 113 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 NUDT10Q8NFP7 164 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 NUDT11Q96G61 164 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 TMEM208Q9BTX3 173 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 NAT8BQ9UHF3 227 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
PRPF40A-204ENST00000450303 TRAV12-3A0A0B4J271 114 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 A8MWL6 223 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 SNURFLB1AK76 121 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 IGLL5B9A064 214 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 P01737 135 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 FAM162BQ5T6X4 162 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 Q6ZTC4 211 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 ZC2HC1AQ96GY0 325 aa12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-204ENST00000450303 TCL1AP56279 114 aa12.22□□□□□ -0.45
PRPF40A-204ENST00000450303 RAB4BP61018 213 aa12.22□□□□□ -0.45
PRPF40A-204ENST00000450303 S100A12P80511 92 aa12.22□□□□□ -0.45
PRPF40A-204ENST00000450303 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
PRPF40A-204ENST00000450303 KIR3DS1Q14943 382 aa12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 PRR9Q5T870 116 aa12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 OR10D4PQ8NGN7 298 aa12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 LINC01587Q99440 93 aa12.21□□□□□ -0.45
PRPF40A-204ENST00000450303 ZNF324O75467 553 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 FABP4P15090 132 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 EMP1P54849 157 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 PDZD11Q5EBL8 140 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 FAM159AQ6UWV7 190 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 GFRA4Q9GZZ7 299 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
PRPF40A-204ENST00000450303 TRAV10A0A0B4J240 114 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 FAM231BA6NCW3 169 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 SH2D1AO60880 128 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 DNLZQ5SXM8 178 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 PACRGQ96M98 296 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 NIT2Q9NQR4 276 aa12.19□□□□□ -0.46
PRPF40A-204ENST00000450303 ORM1P02763 201 aa12.18□□□□□ -0.46
PRPF40A-204ENST00000450303 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-204ENST00000450303 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
PRPF40A-204ENST00000450303 NEU1Q99519 415 aa12.18□□□□□ -0.46
PRPF40A-204ENST00000450303 NAGKQ9UJ70 344 aa12.18□□□□□ -0.46
PRPF40A-204ENST00000450303 IGHV1OR15-1A0A075B7D0 117 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 SMIM9A6NGZ8 99 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 PCP4L1A6NKN8 68 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 APCSP02743 223 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 CRIP1P50238 77 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 HIST1H2BLQ99880 126 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 LINC00467Q9BRT7 94 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 BIRC6Q9NR09 4857 aa12.17□□□□□ -0.46
PRPF40A-204ENST00000450303 IGHV4-4A0A075B6R2 117 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 TMEM189A5PLL7 270 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 SPINK4O60575 86 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 MUC21Q5SSG8 566 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 BAGE3Q86Y29 109 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
PRPF40A-204ENST00000450303 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 CBY3A6NI87 242 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 HTN1P15515 57 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 TCTAP57738 103 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 RPS20P60866 119 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 Q0VG73 95 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 RRN3P1Q2M238 152 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 ANXA2RQ3ZCQ2 193 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
PRPF40A-204ENST00000450303 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms