RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CXorf65A6NEN9 183 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 SNURFLB1AK76 121 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 CTRLP40313 264 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
TNF-208ENST00000449264 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 SMIM9A6NGZ8 99 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 M0R381 172 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 DEFB4AO15263 64 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 SNAI2O43623 268 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
TNF-208ENST00000449264 ZNF493Q6ZR52 646 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 FOXA3P55318 350 aaPredicted RBP10.53□□□□□ -0.72
TNF-208ENST00000449264 ELOBQ15370 118 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
TNF-208ENST00000449264 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
TNF-208ENST00000449264 TGIF2-C20orf24A0A0A6YYL0 155 aa10.52□□□□□ -0.73
TNF-208ENST00000449264 A0A1B0GUT8 65 aa10.52□□□□□ -0.73
TNF-208ENST00000449264 F2Z2F3 143 aa10.52□□□□□ -0.73
TNF-208ENST00000449264 MIFP14174 115 aa10.52□□□□□ -0.73
TNF-208ENST00000449264 TM2D3Q9BRN9 247 aa10.52□□□□□ -0.73
TNF-208ENST00000449264 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
TNF-208ENST00000449264 PRKDCP78527 4128 aaKnown RBP10.52□□□□□ -0.73
TNF-208ENST00000449264 PLAC8L1A1L4L8 177 aa10.51□□□□□ -0.73
TNF-208ENST00000449264 Q8NAQ8 132 aa10.51□□□□□ -0.73
TNF-208ENST00000449264 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
TNF-208ENST00000449264 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
TNF-208ENST00000449264 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
TNF-208ENST00000449264 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
TNF-208ENST00000449264 TWIST1Q15672 202 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 SPXQ9BT56 116 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
TNF-208ENST00000449264 TRGV1A0A0A0MS02 117 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 M0R2P5 195 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 NTF3P20783 257 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 CAMPP49913 170 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 CACNG7P62955 275 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 SYT8Q8NBV8 401 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 CNFNQ9BYD5 112 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 MSRB1Q9NZV6 116 aa10.5□□□□□ -0.73
TNF-208ENST00000449264 TRAV9-1A0A075B6T8 112 aa10.49□□□□□ -0.73
TNF-208ENST00000449264 RIGQ13278 110 aa10.49□□□□□ -0.73
TNF-208ENST00000449264 YPEL4Q96NS1 127 aa10.49□□□□□ -0.73
TNF-208ENST00000449264 HBBP68871 147 aa10.48□□□□□ -0.73
TNF-208ENST00000449264 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
TNF-208ENST00000449264 Q6ZTI0 123 aa10.48□□□□□ -0.73
TNF-208ENST00000449264 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
TNF-208ENST00000449264 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.48□□□□□ -0.73
TNF-208ENST00000449264 COL7A1Q02388 2944 aa10.48□□□□□ -0.73
TNF-208ENST00000449264 NXPH4O95158 308 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 RAB4BP61018 213 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 FAM210BQ96KR6 192 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 TRBV24-1A0A075B6N3 115 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 A0A1B0GXF2 115 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 FAM222AQ5U5X8 452 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 WDR73Q6P4I2 378 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 AP1S3Q96PC3 154 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 JPT2Q9H910 190 aa10.47□□□□□ -0.73
TNF-208ENST00000449264 NACAE9PAV3 2078 aa10.46□□□□□ -0.73
TNF-208ENST00000449264 IGHV4-4A0A075B6R2 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 GAGE12BA1L429 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 GAGE7O76087 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 GAGE12FP0CL80 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 GAGE12GP0CL81 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 GAGE12IP0CL82 117 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 CELA1Q9UNI1 258 aa10.46□□□□□ -0.74
TNF-208ENST00000449264 A0A0J9YWU9 116 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 TRGC1P0CF51 173 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 DEFB130BP0DP73 79 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 DEFB130AP0DP74 79 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 EVI2AP22794 236 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
TNF-208ENST00000449264 TRGV2A0A075B6R0 118 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 A0A087WWL8 130 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 A0A1B0GW15 77 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 COLCA2A8K830 154 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 LYRM9A8MSI8 78 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 S100A8P05109 93 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
TNF-208ENST00000449264 RASL10AQ92737 203 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
TNF-208ENST00000449264 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 PTH2Q96A98 100 aa10.44□□□□□ -0.74
TNF-208ENST00000449264 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
TNF-208ENST00000449264 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms