RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
CHRD-205ENST00000448472 A0A087WWL8 130 aa12.09□□□□□ -0.47
CHRD-205ENST00000448472 LGALS1P09382 135 aaKnown RBP12.09□□□□□ -0.47
CHRD-205ENST00000448472 TAL2Q16559 108 aa12.09□□□□□ -0.47
CHRD-205ENST00000448472 HERVK_113P61574 105 aa12.08□□□□□ -0.47
CHRD-205ENST00000448472 CDSNQ15517 529 aa12.08□□□□□ -0.47
CHRD-205ENST00000448472 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.47
CHRD-205ENST00000448472 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.47
CHRD-205ENST00000448472 MRAP2Q96G30 205 aa12.08□□□□□ -0.47
CHRD-205ENST00000448472 RBAKDNA6NC62 111 aa12.08□□□□□ -0.48
CHRD-205ENST00000448472 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
CHRD-205ENST00000448472 MINOS1Q5TGZ0 78 aa12.08□□□□□ -0.48
CHRD-205ENST00000448472 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
CHRD-205ENST00000448472 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
CHRD-205ENST00000448472 MINOS1-NBL1R4GNA1 71 aa12.08□□□□□ -0.48
CHRD-205ENST00000448472 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
CHRD-205ENST00000448472 PF4V1P10720 104 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
CHRD-205ENST00000448472 Q1RN00 199 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 CACNA1AO00555 2505 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 CLPSL1A2RUU4 121 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 RASL10AQ92737 203 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 ZFYVE26Q68DK2 2539 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 BRD3OSQ6XYD6 125 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 BAALCQ8WXS3 180 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
CHRD-205ENST00000448472 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
CHRD-205ENST00000448472 HTN1P15515 57 aa12.06□□□□□ -0.48
CHRD-205ENST00000448472 JPT2Q9H910 190 aa12.06□□□□□ -0.48
CHRD-205ENST00000448472 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 OOSP1A8MZH6 123 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 RPL39P62891 51 aaKnown RBP12.05□□□□□ -0.48
CHRD-205ENST00000448472 UNQ9165/PRO28630Q6UXU0 137 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 RAX2Q96IS3 184 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
CHRD-205ENST00000448472 BEX4Q9NWD9 120 aaPredicted RBP12.05□□□□□ -0.48
CHRD-205ENST00000448472 TRBV7-1A0A0A6YYK4 115 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 C9orf139Q6ZV77 190 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 KIR2DL4Q99706 377 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 FAM159AQ6UWV7 190 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 C9orf47Q6ZRZ4 202 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 Q8N6K4 173 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
CHRD-205ENST00000448472 CD7P09564 240 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 BPESC1Q9GZL8 116 aa12.03□□□□□ -0.48
CHRD-205ENST00000448472 LGALS3P17931 250 aaKnown RBP12.02□□□□□ -0.48
CHRD-205ENST00000448472 FOXI1Q12951 378 aa12.02□□□□□ -0.48
CHRD-205ENST00000448472 MORN3Q6PF18 240 aaPredicted RBP12.02□□□□□ -0.48
CHRD-205ENST00000448472 TRAV12-1A0A0B4J245 112 aa12.02□□□□□ -0.49
CHRD-205ENST00000448472 ZNF56Q15929 161 aa12.02□□□□□ -0.49
CHRD-205ENST00000448472 LYRM7Q5U5X0 104 aa12.02□□□□□ -0.49
CHRD-205ENST00000448472 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
CHRD-205ENST00000448472 UBE2E1P51965 193 aa12.01□□□□□ -0.49
CHRD-205ENST00000448472 ACACBO00763 2458 aa12.01□□□□□ -0.49
CHRD-205ENST00000448472 TRAV2A0A0B4J234 112 aa12.01□□□□□ -0.49
CHRD-205ENST00000448472 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
CHRD-205ENST00000448472 NPFFO15130 113 aa12□□□□□ -0.49
CHRD-205ENST00000448472 LINC01546A6NGU7 62 aa12□□□□□ -0.49
CHRD-205ENST00000448472 TSPAN13O95857 204 aa12□□□□□ -0.49
CHRD-205ENST00000448472 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
CHRD-205ENST00000448472 PRSS2P07478 247 aa12□□□□□ -0.49
CHRD-205ENST00000448472 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 OVOL1O14753 267 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 ZFAND2AQ8N6M9 145 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 EBI3Q14213 229 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 A8MWV9 139 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 SIRPDQ9H106 197 aa11.99□□□□□ -0.49
CHRD-205ENST00000448472 CLUHP3Q96NS8 147 aa11.98□□□□□ -0.49
CHRD-205ENST00000448472 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
CHRD-205ENST00000448472 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
CHRD-205ENST00000448472 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
CHRD-205ENST00000448472 MT-ATP8P03928 68 aa11.98□□□□□ -0.49
CHRD-205ENST00000448472 C1orf122Q6ZSJ8 110 aa11.98□□□□□ -0.49
CHRD-205ENST00000448472 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 Q6ZS46 218 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 MRPL53Q96EL3 112 aaKnown RBP11.97□□□□□ -0.49
CHRD-205ENST00000448472 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 PMVKQ15126 192 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 C9JAW5 83 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 PPP1R17O96001 155 aa11.97□□□□□ -0.49
CHRD-205ENST00000448472 TCF15Q12870 199 aa11.96□□□□□ -0.49
CHRD-205ENST00000448472 IGHV4-39P01824 125 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 ZNF688P0C7X2 276 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 NFE4Q86UQ8 179 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 C5orf56Q8N8D9 126 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 PRO0461Q9UI25 63 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 MOB4Q9Y3A3 225 aa11.96□□□□□ -0.5
CHRD-205ENST00000448472 TCL1BO95988 128 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms