RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CLPSL2Q6UWE3 100 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 ZFP2Q6ZN57 461 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 S100A7AQ86SG5 101 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 KRTAP11-1Q8IUC1 163 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 CROCCP3Q8IVE0 287 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 LINC00269Q8N2A0 174 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 C14orf178Q8N769 122 aaPredicted RBP1.82□□□□□ -2.12
PMS1-215ENST00000447232 PTH2Q96A98 100 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 KRTAP2-4Q9BYR9 128 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 NAA50Q9GZZ1 169 aaKnown RBP1.82□□□□□ -2.12
PMS1-215ENST00000447232 FAM107BQ9H098 131 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 ARV1Q9H2C2 271 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 RBKSQ9H477 322 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 ACOT13Q9NPJ3 140 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 IFT46Q9NQC8 304 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 IGKV2-40A0A087WW87 121 aaPredicted RBP1.81□□□□□ -2.12
PMS1-215ENST00000447232 IGKV2D-40P01614 121 aaPredicted RBP1.81□□□□□ -2.12
PMS1-215ENST00000447232 TYMSP04818 313 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TMEM78Q5T7P6 136 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 LINC00305Q7Z4B0 112 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 SMIM29Q86T20 159 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TYMSOSQ8TAI1 123 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 PARLQ9H300 379 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 PKIGQ9Y2B9 76 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 IGLV5-37A0A075B6J1 123 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TRBV6-8A0A0A6YYG3 113 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TRAV8-4A0A0B4J246 113 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 K7EPK0 472 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 B3GALNT1O75752 331 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 NDUFB4O95168 129 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TSHBP01222 138 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 P01737 135 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 RCVRNP35243 200 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 SELENOTP62341 195 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 DNAL1Q4LDG9 190 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 ZNF506Q5JVG8 444 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 FP248Q71RG6 208 aaPredicted RBP1.81□□□□□ -2.12
PMS1-215ENST00000447232 PHF5AQ7RTV0 110 aaKnown RBP1.81□□□□□ -2.12
PMS1-215ENST00000447232 PRSS48Q7RTY5 328 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 SELENOHQ8IZQ5 122 aaKnown RBP1.81□□□□□ -2.12
PMS1-215ENST00000447232 CCDC197Q8NCU1 140 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 OR13C8Q8NGS7 320 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 OR2T35Q8NGX2 323 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 GLYATL2Q8WU03 294 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 ARL6Q9H0F7 186 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 DUSP21Q9H596 190 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 PRELID1Q9Y255 219 aa1.81□□□□□ -2.12
PMS1-215ENST00000447232 TRBV19A0A075B6N1 114 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 GVQW2A0A096LPI5 108 aaPredicted RBP1.8□□□□□ -2.12
PMS1-215ENST00000447232 PGPEP1LA6NFU8 196 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 GYG2O15488 501 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 EIF3GO75821 320 aaKnown RBP eCLIP1.8□□□□□ -2.12
PMS1-215ENST00000447232 TNFRSF6BO95407 300 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 SULT1A3P0DMM9 295 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 SULT1A4P0DMN0 295 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 PGAM2P15259 253 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 UBE2D3P61077 147 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 PKIAP61925 76 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 RAB11AP62491 216 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 UBE2D2P62837 147 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 RBX1P62877 108 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 EIF5AP63241 154 aaKnown RBP1.8□□□□□ -2.12
PMS1-215ENST00000447232 AKR1C1Q04828 323 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 REG3AQ06141 175 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 HIGD2BQ4VC39 106 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 LHFPL1Q86WI0 220 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 TSKUQ8WUA8 353 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 CYGBQ8WWM9 190 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 TMEM18Q96B42 140 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 ATP5SQ99766 215 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 TRAV6A0A075B6T7 132 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 SMIM30A4D0T7 59 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 HIST1H1EP10412 219 aaKnown RBP1.8□□□□□ -2.12
PMS1-215ENST00000447232 MYL9P24844 172 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 PCP4P48539 62 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 MLLT11Q13015 90 aaPredicted RBP1.8□□□□□ -2.12
PMS1-215ENST00000447232 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
PMS1-215ENST00000447232 TMEM268Q5VZI3 342 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 OR5H6Q8NGV6 325 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 WFDC1Q9HC57 220 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 NAGKQ9UJ70 344 aa1.8□□□□□ -2.12
PMS1-215ENST00000447232 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 RAB2AP61019 212 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 KRTAP13-2Q52LG2 175 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 CFAP161Q6P656 301 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 EXOC3-AS1Q8N2X6 119 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 KCNS1Q96KK3 526 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 C9orf16Q9BUW7 83 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 A0A087WZ39 114 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 A8MWV9 139 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 PTTG1O95997 202 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 CAV2P51636 162 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 PDE6HQ13956 83 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 ZNF674Q2M3X9 581 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 C20orf203Q8NBC4 194 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 COPZ2Q9P299 210 aa1.79□□□□□ -2.12
PMS1-215ENST00000447232 LENEPQ9Y5L5 61 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms