RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SPINK4O60575 86 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 GAGE7O76087 117 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 GAGE12FP0CL80 117 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 GAGE12GP0CL81 117 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 GAGE12IP0CL82 117 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 SPART-AS1P0CW21 52 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 CT83Q5H943 113 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 FER1L6-AS1Q8NA97 138 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 GTSF1Q8WW33 167 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 SSTP61278 116 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 OR10AG1Q8NH19 301 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
TRAPPC4-203ENST00000447216 SNAI2O43623 268 aa12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 NANOS2P60321 138 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 PGLYRP4Q96LB8 373 aa12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 PHLDA3Q9Y5J5 127 aa12.8□□□□□ -0.36
TRAPPC4-203ENST00000447216 C7orf77A4D0Y5 90 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 M0R381 172 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 PPP1R2P9O14990 202 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 DAD1P61803 113 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-203ENST00000447216 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
TRAPPC4-203ENST00000447216 LGALS9BQ3B8N2 356 aa12.78□□□□□ -0.36
TRAPPC4-203ENST00000447216 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
TRAPPC4-203ENST00000447216 ANAPC16Q96DE5 110 aa12.78□□□□□ -0.36
TRAPPC4-203ENST00000447216 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 HIGD1CA8MV81 97 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 CTRLP40313 264 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 SPANXN1Q5VSR9 72 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 ZFP82Q8N141 532 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 SVBPQ8N300 66 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 RASL10AQ92737 203 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 JPT2Q9H910 190 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 RPS10P5Q9NQ39 176 aa12.77□□□□□ -0.37
TRAPPC4-203ENST00000447216 DNAH7Q8WXX0 4024 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 SMIM27A0A1W2PRY6 76 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 SNAPINO95295 136 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 RHEBQ15382 184 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 Q6ZTC4 211 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 SYT8Q8NBV8 401 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 PTH2Q96A98 100 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 GFRA4Q9GZZ7 299 aa12.76□□□□□ -0.37
TRAPPC4-203ENST00000447216 F2Z2F3 143 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 NXPH4O95158 308 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 FOXA3P55318 350 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 ATRAIDQ6UW56 229 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 NUP35Q8NFH5 326 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 CTDSP1Q9GZU7 261 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
TRAPPC4-203ENST00000447216 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
TRAPPC4-203ENST00000447216 HTN3P15516 51 aa12.74□□□□□ -0.37
TRAPPC4-203ENST00000447216 CACNG7P62955 275 aa12.74□□□□□ -0.37
TRAPPC4-203ENST00000447216 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
TRAPPC4-203ENST00000447216 NTF3P20783 257 aa12.73□□□□□ -0.37
TRAPPC4-203ENST00000447216 FAM3BP58499 235 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-203ENST00000447216 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
TRAPPC4-203ENST00000447216 A0A087WWC5 75 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 RS1O15537 224 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 CFAP126Q5VTH2 177 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 OR4C5Q8NGB2 326 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 ZNF479Q96JC4 524 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 SAMD10Q9BYL1 202 aa12.72□□□□□ -0.37
TRAPPC4-203ENST00000447216 IGHV4-4A0A075B6R2 117 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 IGHV3-73A0A0B4J1V6 119 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 TRAV4A0A0B4J268 109 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 A0A1B0GUT8 65 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 TWIST1Q15672 202 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
TRAPPC4-203ENST00000447216 A0A087WWL8 130 aa12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 ATP5G1P05496 136 aa12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 PIK3CD-AS1Q5SR53 167 aa12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 MRPL54Q6P161 138 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 C18orf15Q96N68 181 aa12.7□□□□□ -0.38
TRAPPC4-203ENST00000447216 A8MWV9 139 aa12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 HOXA5P20719 270 aa12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 FAM74A4Q5TZK3 123 aa12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 C14orf178Q8N769 122 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 URGCP-MRPS24S4R325 110 aa12.69□□□□□ -0.38
TRAPPC4-203ENST00000447216 F5H768 121 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 CRYGDP07320 174 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms