RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
SMIM12-204ENST00000446026 VPREB3Q9UKI3 123 aa6.87□□□□□ -1.31
SMIM12-204ENST00000446026 F8P00451 2351 aa6.87□□□□□ -1.31
SMIM12-204ENST00000446026 TGFAP01135 160 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 IGKCP01834 107 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 GAGE2BQ13066 116 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 GAGE2EQ4V326 116 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 FAM159AQ6UWV7 190 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 GAGE2DQ9UEU5 116 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMIM12-204ENST00000446026 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
SMIM12-204ENST00000446026 H3BVH4 76 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 RHODO00212 210 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 PAX8Q06710 450 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 RNF125Q96EQ8 232 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 TRAV4A0A0B4J268 109 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 NPYP01303 97 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 HES1Q14469 280 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 KAAG1Q9UBP8 84 aa6.86□□□□□ -1.31
SMIM12-204ENST00000446026 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 HOXA3O43365 443 aaPredicted RBP6.85□□□□□ -1.31
SMIM12-204ENST00000446026 NDPQ00604 133 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 CREBBPQ92793 2442 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 TRAV40A0A0B4J280 105 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 H3BRN7 92 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 SRD5A1P18405 259 aa6.85□□□□□ -1.31
SMIM12-204ENST00000446026 ZNF469Q96JG9 3925 aaPredicted RBP6.84□□□□□ -1.31
SMIM12-204ENST00000446026 B4DSR2 109 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
SMIM12-204ENST00000446026 IFITM1P13164 125 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 EVI2AP22794 236 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 LEPP41159 167 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
SMIM12-204ENST00000446026 MRPL51Q4U2R6 128 aaKnown RBP6.84□□□□□ -1.31
SMIM12-204ENST00000446026 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 CKS2P33552 79 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 TIMD4Q96H15 378 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
SMIM12-204ENST00000446026 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 TRBV7-3A0A075B6L6 115 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 IGHV4-61A0A0C4DH41 118 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 F8W735 103 aaPredicted RBP6.83□□□□□ -1.32
SMIM12-204ENST00000446026 SNCGO76070 127 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 DPM2O94777 84 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 TAL2Q16559 108 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 BPESC1Q9GZL8 116 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 IGHV3-66A0A0C4DH42 116 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 INAFM1C9JVW0 142 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 SH2D1AO60880 128 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 Q6ZQT7 251 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 U3KQK5 164 aa6.83□□□□□ -1.32
SMIM12-204ENST00000446026 POLQO75417 2590 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 NCBP2LA6PVI3 153 aaKnown RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 LY6LH3BQJ8 138 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 SMR3AQ99954 134 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 SORL1Q92673 2214 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 FLNAP21333 2647 aaKnown RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 CENPVL3A0A0U1RRI6 287 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 FSHBP01225 129 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 GATA1P15976 413 aaPredicted RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 LMO4P61968 165 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 ZNF575Q86XF7 245 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 NSD1Q96L73 2696 aaPredicted RBP6.82□□□□□ -1.32
SMIM12-204ENST00000446026 IGHV3-49A0A0A0MS15 119 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 A8MWV9 139 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 TMEM262E9PQX1 116 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 NBR2O15453 112 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 NDUFA3O95167 84 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 ERCC8Q13216 396 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 ZNF493Q6ZR52 646 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
SMIM12-204ENST00000446026 TWIST1Q15672 202 aa6.81□□□□□ -1.32
SMIM12-204ENST00000446026 PRIMA1Q86XR5 153 aa6.81□□□□□ -1.32
SMIM12-204ENST00000446026 CFHR4Q92496 578 aa6.81□□□□□ -1.32
SMIM12-204ENST00000446026 VCX2Q9H322 139 aa6.81□□□□□ -1.32
SMIM12-204ENST00000446026 ABCA2Q9BZC7 2435 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms