RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PSMB8P28062 276 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 SLC25A29Q8N8R3 303 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 ATP5G1P05496 136 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 DIAPH2-AS1Q14236 149 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 Q6ZUT4 128 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 FAM215AQ9Y5M1 114 aa14.59□□□□□ -0.07
SHANK3-203ENST00000445220 GNRH2O43555 120 aa14.58□□□□□ -0.07
SHANK3-203ENST00000445220 FRMD6-AS1P0C7T7 363 aa14.58□□□□□ -0.07
SHANK3-203ENST00000445220 KAAG1Q9UBP8 84 aa14.58□□□□□ -0.07
SHANK3-203ENST00000445220 IGHV1-69P01742 117 aa14.58□□□□□ -0.08
SHANK3-203ENST00000445220 RBX1P62877 108 aa14.58□□□□□ -0.08
SHANK3-203ENST00000445220 MSRB1Q9NZV6 116 aa14.58□□□□□ -0.08
SHANK3-203ENST00000445220 NOTCH4Q99466 2003 aa14.58□□□□□ -0.08
SHANK3-203ENST00000445220 USF3Q68DE3 2245 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 PATE2Q6UY27 113 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 RPL39LQ96EH5 51 aaKnown RBP14.57□□□□□ -0.08
SHANK3-203ENST00000445220 IGFBPL1Q8WX77 278 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 NUP210Q8TEM1 1887 aaPredicted RBP14.57□□□□□ -0.08
SHANK3-203ENST00000445220 hADV29S1A0JD25 119 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 ODF1Q14990 250 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 YLPM1P49750 1951 aaKnown RBP14.57□□□□□ -0.08
SHANK3-203ENST00000445220 C8orf31Q8N9H6 132 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 FAM167A-AS1Q96KT0 104 aa14.57□□□□□ -0.08
SHANK3-203ENST00000445220 ZFP2Q6ZN57 461 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 PTH2Q96A98 100 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 CFHR3Q02985 330 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 Q71RC1 249 aaPredicted RBP14.56□□□□□ -0.08
SHANK3-203ENST00000445220 NOTCH3Q9UM47 2321 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 C5orf47Q569G3 176 aa14.56□□□□□ -0.08
SHANK3-203ENST00000445220 Q6ZSR3 168 aa14.55□□□□□ -0.08
SHANK3-203ENST00000445220 KIAA1671Q9BY89 1806 aa14.55□□□□□ -0.08
SHANK3-203ENST00000445220 PIFOQ8TCI5 191 aa14.55□□□□□ -0.08
SHANK3-203ENST00000445220 IGHV7-4-1A0A0J9YVY3 117 aa14.55□□□□□ -0.08
SHANK3-203ENST00000445220 NDUFV3P56181 108 aaKnown RBP14.55□□□□□ -0.08
SHANK3-203ENST00000445220 DOCK7Q96N67 2140 aa14.54□□□□□ -0.08
SHANK3-203ENST00000445220 ACACBO00763 2458 aa14.54□□□□□ -0.08
SHANK3-203ENST00000445220 NCOR2Q9Y618 2525 aa14.54□□□□□ -0.08
SHANK3-203ENST00000445220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.53□□□□□ -0.08
SHANK3-203ENST00000445220 IGKV2-29A2NJV5 120 aaPredicted RBP14.53□□□□□ -0.08
SHANK3-203ENST00000445220 LGALS9O00182 355 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 LINC00643Q86TS7 51 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 C11orf1Q9H5F2 150 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 SHANK1Q9Y566 2161 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 CRYGBP07316 175 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 RNF114Q9Y508 228 aa14.53□□□□□ -0.08
SHANK3-203ENST00000445220 PCNX2A6NKB5 2137 aa14.52□□□□□ -0.08
SHANK3-203ENST00000445220 MT-ATP8P03928 68 aa14.52□□□□□ -0.08
SHANK3-203ENST00000445220 BAALCQ8WXS3 180 aa14.52□□□□□ -0.08
SHANK3-203ENST00000445220 TOMM6Q96B49 74 aa14.52□□□□□ -0.08
SHANK3-203ENST00000445220 SND1-IT1Q9HBX3 110 aa14.52□□□□□ -0.09
SHANK3-203ENST00000445220 RUSC1-AS1Q66K80 236 aa14.52□□□□□ -0.09
SHANK3-203ENST00000445220 OTOGLQ3ZCN5 2332 aa14.51□□□□□ -0.09
SHANK3-203ENST00000445220 J3QLI3 93 aa14.51□□□□□ -0.09
SHANK3-203ENST00000445220 IGFL2Q6UWQ7 119 aa14.51□□□□□ -0.09
SHANK3-203ENST00000445220 SPANXB1Q9NS25 103 aaPredicted RBP14.5□□□□□ -0.09
SHANK3-203ENST00000445220 LINC01619G3V211 115 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 CTRLP40313 264 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 IGF2-ASQ6U949 168 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 NDUFA11Q86Y39 141 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 C11orf86A6NJI1 115 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
SHANK3-203ENST00000445220 FGF23Q9GZV9 251 aaPredicted RBP14.5□□□□□ -0.09
SHANK3-203ENST00000445220 IGKV1-17P01599 117 aa14.49□□□□□ -0.09
SHANK3-203ENST00000445220 TIMM17AQ99595 171 aa14.49□□□□□ -0.09
SHANK3-203ENST00000445220 C22orf46C9J442 243 aa14.49□□□□□ -0.09
SHANK3-203ENST00000445220 JMJD7-PLA2G4BH0Y9G9 81 aa14.49□□□□□ -0.09
SHANK3-203ENST00000445220 I3L2K1 104 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 SPRY2O43597 315 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 RNF223E7ERA6 249 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 CLEC2BQ92478 149 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 TCL1BO95988 128 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 TRAV4A0A0B4J268 109 aa14.48□□□□□ -0.09
SHANK3-203ENST00000445220 TRBV6-1A0A0K0K1D8 114 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 A0A1B0GXF2 115 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 UQCRQO14949 82 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 KRTAP27-1Q3LI81 207 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 C19orf71A6NCJ1 209 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 PSCAO43653 123 aa14.47□□□□□ -0.09
SHANK3-203ENST00000445220 OPRPNQ99935 248 aaPredicted RBP14.47□□□□□ -0.09
SHANK3-203ENST00000445220 PCNX1Q96RV3 2341 aa14.46□□□□□ -0.09
SHANK3-203ENST00000445220 F5H768 121 aa14.46□□□□□ -0.09
SHANK3-203ENST00000445220 DAD1P61803 113 aa14.46□□□□□ -0.09
SHANK3-203ENST00000445220 FUSP35637 526 aaKnown RBP eCLIP14.46□□□□□ -0.092e-6■■■□□ 15.1
SHANK3-203ENST00000445220 Q8N1Y9 231 aa14.46□□□□□ -0.09
SHANK3-203ENST00000445220 PLXND1Q9Y4D7 1925 aa14.46□□□□□ -0.09
SHANK3-203ENST00000445220 K7EIM0 57 aa14.46□□□□□ -0.1
SHANK3-203ENST00000445220 BRK1Q8WUW1 75 aa14.46□□□□□ -0.1
SHANK3-203ENST00000445220 YPEL4Q96NS1 127 aa14.45□□□□□ -0.1
SHANK3-203ENST00000445220 H3BUA1 57 aa14.45□□□□□ -0.1
SHANK3-203ENST00000445220 RPL39P62891 51 aaKnown RBP14.45□□□□□ -0.1
SHANK3-203ENST00000445220 H3BQ85 93 aa14.45□□□□□ -0.1
SHANK3-203ENST00000445220 ANGP03950 147 aaKnown RBP14.45□□□□□ -0.1
SHANK3-203ENST00000445220 UBE2DNLQ8IWF7 75 aa14.45□□□□□ -0.1
SHANK3-203ENST00000445220 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
SHANK3-203ENST00000445220 XCL1P47992 114 aa14.44□□□□□ -0.1
SHANK3-203ENST00000445220 WFDC9Q8NEX5 89 aa14.44□□□□□ -0.1
SHANK3-203ENST00000445220 COX7B2Q8TF08 81 aa14.44□□□□□ -0.1
SHANK3-203ENST00000445220 TM2D2Q9BX73 214 aa14.43□□□□□ -0.1
SHANK3-203ENST00000445220 IGKV1OR2-108A0A075B7D4 117 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms