RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FAM231CP0DMU5 169 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 C5orf47Q569G3 176 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 DEFB109BQ30KR1 87 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 ZNF491Q8N8L2 437 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 BUB1B-PAK6H3BSN5 160 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 WT1P19544 449 aaPredicted RBP3.89□□□□□ -1.79
HERC1-201ENST00000443617 HERVK_113P63121 156 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 GFRALQ6UXV0 394 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 PRAC2D3DTV9 90 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 TEX22C9J3V5 150 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 C3orf36Q3SXR2 165 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 BAALCQ8WXS3 180 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 CD7P09564 240 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 ODF3Q96PU9 254 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 CRLF1O75462 422 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 ZNF80P51504 273 aaPredicted RBP3.88□□□□□ -1.79
HERC1-201ENST00000443617 PTPRBP23467 1997 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
HERC1-201ENST00000443617 RASL10AQ92737 203 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 FAM240AA0A1B0GVK7 77 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 C17orf100A8MU93 164 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 MUSTN1Q8IVN3 82 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 MAFAQ8NHW3 353 aaPredicted RBP3.88□□□□□ -1.79
HERC1-201ENST00000443617 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
HERC1-201ENST00000443617 C11orf86A6NJI1 115 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 ID1P41134 155 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 ECSCRQ19T08 205 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 PATE3B3GLJ2 98 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 ATP5J2P56134 94 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 TP53TG1Q9Y2A0 90 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.88□□□□□ -1.79
HERC1-201ENST00000443617 A0A0J9YY99 117 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 DKK4Q9UBT3 224 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 CHD8Q9HCK8 2581 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 ADARB2-AS1A8MUL3 147 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 TMEM263Q8WUH6 116 aaKnown RBP3.87□□□□□ -1.79
HERC1-201ENST00000443617 ADIPOQQ15848 244 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 ACYP1P07311 99 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 SPXQ9BT56 116 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 DPH3P1Q9H4G8 78 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 KLRB1Q12918 225 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 CFHR4Q92496 578 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 TRGV11A0A075B6L2 103 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 ACANP16112 2415 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 TNFRSF18Q9Y5U5 241 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 FAM236AA0A1B0GUQ0 79 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 FAM236BA0A1B0GV22 79 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 C15orf32Q32M92 178 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 SBSPONQ8IVN8 264 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 MUC4Q99102 2169 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 PRSS33Q8NF86 280 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 LEPROTO15243 131 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 NDUFA12Q9UI09 145 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 ICOSQ9Y6W8 199 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 MRPS12O15235 138 aaKnown RBP3.87□□□□□ -1.79
HERC1-201ENST00000443617 CTSGP08311 255 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 DEFB104AQ8WTQ1 72 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
HERC1-201ENST00000443617 EXPH5Q8NEV8 1989 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LYPD2Q6UXB3 125 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 SPRY2O43597 315 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LINC00694P0DN24 101 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 TMEM105Q8N8V8 129 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 NUP37Q8NFH4 326 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 MUC22E2RYF6 1773 aaPredicted RBP3.86□□□□□ -1.79
HERC1-201ENST00000443617 IGHV3-64A0A075B6Q5 118 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LOXP28300 417 aaPredicted RBP3.86□□□□□ -1.79
HERC1-201ENST00000443617 BSPH1Q075Z2 132 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 MRPL53Q96EL3 112 aaKnown RBP3.86□□□□□ -1.79
HERC1-201ENST00000443617 A0A087WWL8 130 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 TRAV21A0A0B4J279 112 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 PF4V1P10720 104 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 POLQO75417 2590 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 IGKV3D-20A0A0C4DH25 116 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 IGLV2-18A0A075B6J9 118 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 CD59P13987 128 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LINC01587Q99440 93 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LINC01548A6NM66 108 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 BPTFQ12830 3046 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 H7C423 109 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 BAALC-AS2P0C853 105 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 RHOHQ15669 191 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 LRRC75A-AS1Q8N1F1 130 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 IGHG3P01860 377 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 ATP5G1P05496 136 aa3.86□□□□□ -1.79
HERC1-201ENST00000443617 OVOL1O14753 267 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 CDX4O14627 284 aaPredicted RBP3.85□□□□□ -1.79
HERC1-201ENST00000443617 DNAL4O96015 105 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 NRGNQ92686 78 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 LINC00477Q96M19 166 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 IGLV3-9A0A075B6K5 115 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 C1orf210Q8IVY1 113 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 CLEC2BQ92478 149 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 IGHV4-4A0A075B6R2 117 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms