RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 IGHV4-38-2P0DP08 117 aa9.96□□□□□ -0.81
SLC48A1-201ENST00000442218 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.81
SLC48A1-201ENST00000442218 ZNF48Q96MX3 618 aaPredicted RBP9.96□□□□□ -0.81
SLC48A1-201ENST00000442218 GTSF1LQ9H1H1 148 aa9.96□□□□□ -0.81
SLC48A1-201ENST00000442218 CHD6Q8TD26 2715 aa9.96□□□□□ -0.81
SLC48A1-201ENST00000442218 IGHV4-39P01824 125 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 IGHV4-61A0A0C4DH41 118 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 UBE2E1P51965 193 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 SCGB2A2Q13296 93 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.82
SLC48A1-201ENST00000442218 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 MINOS1Q5TGZ0 78 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 CEND1Q8N111 149 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 SLC50A1Q9BRV3 221 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 MINOS1-NBL1R4GNA1 71 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 F5H697 171 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 HTN1P15515 57 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 EBI3Q14213 229 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
SLC48A1-201ENST00000442218 INSL3P51460 131 aa9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 GPHB5Q86YW7 130 aa9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 RASL10AQ92737 203 aa9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
SLC48A1-201ENST00000442218 G3V4G9 280 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 ZNF843Q8N446 348 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 DUSP14O95147 198 aaKnown RBP9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 DUX5Q96PT3 197 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
SLC48A1-201ENST00000442218 A0A087WX48 190 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 H3BUX3 64 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 ZFAND2AQ8N6M9 145 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 IGLL5B9A064 214 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 ATP5LO75964 103 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 APOMO95445 188 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 C2orf66Q6UXQ4 117 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 PHLDA1Q8WV24 401 aaPredicted RBP9.92□□□□□ -0.82
SLC48A1-201ENST00000442218 NOTCH2Q04721 2471 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 PRSS29PA6NIE9 313 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 SIVA1O15304 175 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 PRM2P04554 102 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 SLC25A16P16260 332 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 ZNF256Q9Y2P7 627 aaPredicted RBP9.91□□□□□ -0.82
SLC48A1-201ENST00000442218 AVPP01185 164 aa9.9□□□□□ -0.82
SLC48A1-201ENST00000442218 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
SLC48A1-201ENST00000442218 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.82
SLC48A1-201ENST00000442218 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
SLC48A1-201ENST00000442218 IGHV4-30-2A0A087WSY4 118 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 TRBV7-1A0A0A6YYK4 115 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 ASIPP42127 132 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 PIFOQ8TCI5 191 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.83
SLC48A1-201ENST00000442218 ZNF815PA8K554 130 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 OOSP1A8MZH6 123 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 C1orf122Q6ZSJ8 110 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 ZNF418Q8TF45 676 aaPredicted RBP9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
SLC48A1-201ENST00000442218 RBAKDNA6NC62 111 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 TMEM238C9JI98 176 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 F8VRH5 84 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 PTH2Q96A98 100 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 PRRC2AP48634 2157 aaKnown RBP9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 H7C1H1 209 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 CD7P09564 240 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 CCL19Q99731 98 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 H7C2G1 150 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms