RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 IGF2BP2-AS1Q96M15 143 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 C18orf15Q96N68 181 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 C20orf78Q9BR46 151 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 C11orf1Q9H5F2 150 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM238C9JI98 176 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 PAX4O43316 350 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 BUB3O43684 328 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 PROP1O75360 226 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV1-17P01599 117 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 ATP5G1P05496 136 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 RNASE1P07998 156 aaKnown RBP3.53□□□□□ -1.84
SCN3A-204ENST00000440431 MRPL23Q16540 153 aaKnown RBP3.53□□□□□ -1.84
SCN3A-204ENST00000440431 NIT1Q86X76 327 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 ODF3L1Q8IXM7 274 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-204ENST00000440431 FXYD5Q96DB9 178 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 ANK3Q12955 4377 aaKnown RBP3.53□□□□□ -1.84
SCN3A-204ENST00000440431 A0A087X0K7 114 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 MUC21A0A0G2JKD1 596 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 MUC21A0A140T8X8 626 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 MYMXA0A1B0GTQ4 84 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 WI2-2373I1.2A0A1W2PRP0 233 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 SMIM9A6NGZ8 99 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 IGKCP01834 107 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 FXYD7P58549 80 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
SCN3A-204ENST00000440431 C6orf226Q5I0X4 101 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 FAM104BQ5XKR9 115 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF295-AS1Q8N0V1 137 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 NRGNQ92686 78 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 TRAV8-1A0A0A6YYK1 113 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-204ENST00000440431 TRBV6-1A0A0K0K1D8 114 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 SMIM13P0DJ93 91 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 EVI2AP22794 236 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 ANXA2RQ3ZCQ2 193 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 BCL6BQ8N143 479 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-204ENST00000440431 WFDC11Q8NEX6 87 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 PIFOQ8TCI5 191 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 ODF3Q96PU9 254 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 CCDC168Q8NDH2 2452 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 TEX22C9J3V5 150 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 D6R8Y8 96 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 NDUFA7O95182 113 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 CCL18P55774 89 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 HILS1P60008 231 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 BBC3Q96PG8 261 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-204ENST00000440431 OVOL2Q9BRP0 275 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 PDZD2O15018 2839 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE12BA1L429 117 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 KNCNA6PVL3 124 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE7O76087 117 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 ADMP35318 185 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 Q8N8P6 123 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 LYPD6BQ8NI32 183 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 PSMG3-AS1Q96PY0 264 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 MYO18BQ8IUG5 2567 aa3.52□□□□□ -1.85
SCN3A-204ENST00000440431 IGHV4OR15-8A0A075B7B6 117 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 A0A087WW49 117 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 IGHV1-24A0A0C4DH33 117 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 SERF1AO75920 110 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 IGHV3-53P01767 116 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 SLURP1P55000 103 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 KLF5Q13887 457 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-204ENST00000440431 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 AGPAT4-IT1Q9H0P7 198 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 PGPEP1LA6NFU8 196 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 VWC2LB2RUY7 222 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 TNFRSF6BO95407 300 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 Q0VG73 95 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 IGFL4Q6B9Z1 124 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 C9orf47Q6ZRZ4 202 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 MRPL52Q86TS9 123 aaKnown RBP3.51□□□□□ -1.85
SCN3A-204ENST00000440431 CFHR4Q92496 578 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 C1orf159Q96HA4 380 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 SSBP4Q9BWG4 385 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-204ENST00000440431 TM2D2Q9BX73 214 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 PLA2G2EQ9NZK7 142 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 GGTLC3B5MD39 225 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 LY6LH3BQJ8 138 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 ZNF561-AS1K7EIQ3 104 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 DERL1Q9BUN8 251 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 ZNF580Q9UK33 172 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 ICOSQ9Y6W8 199 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 HIVEP3Q5T1R4 2406 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE12JA6NER3 117 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE10A6NGK3 116 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 LY6G6DO95868 133 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 LTAP01374 205 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 TYMSP04818 313 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 LINC00158P58513 81 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE4Q13068 117 aa3.51□□□□□ -1.85
SCN3A-204ENST00000440431 GAGE5Q13069 117 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms