RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
HDAC6-208ENST00000438518 F2Z2F3 143 aa13.14□□□□□ -0.31
HDAC6-208ENST00000438518 H3BVH4 76 aa13.14□□□□□ -0.31
HDAC6-208ENST00000438518 RASL10AQ92737 203 aa13.14□□□□□ -0.31
HDAC6-208ENST00000438518 ANAPC16Q96DE5 110 aa13.14□□□□□ -0.31
HDAC6-208ENST00000438518 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 IGLC6P0CF74 106 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 V9GYV3 84 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
HDAC6-208ENST00000438518 DAD1P61803 113 aa13.12□□□□□ -0.31
HDAC6-208ENST00000438518 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
HDAC6-208ENST00000438518 CELA1Q9UNI1 258 aa13.12□□□□□ -0.31
HDAC6-208ENST00000438518 TRGV1A0A0A0MS02 117 aa13.11□□□□□ -0.31
HDAC6-208ENST00000438518 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-208ENST00000438518 ZNF876PQ49A33 203 aa13.11□□□□□ -0.31
HDAC6-208ENST00000438518 SLC7A5P1Q8MH63 180 aa13.11□□□□□ -0.31
HDAC6-208ENST00000438518 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
HDAC6-208ENST00000438518 CIDEAO60543 219 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 CTRLP40313 264 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 CACNG7P62955 275 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 WDR73Q6P4I2 378 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 Q6ZTI0 123 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 SVBPQ8N300 66 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 WWC2-AS2Q96NR7 200 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
HDAC6-208ENST00000438518 NXPH4O95158 308 aa13.09□□□□□ -0.31
HDAC6-208ENST00000438518 RHEBQ15382 184 aa13.09□□□□□ -0.31
HDAC6-208ENST00000438518 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
HDAC6-208ENST00000438518 RNF212Q495C1 297 aa13.09□□□□□ -0.31
HDAC6-208ENST00000438518 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
HDAC6-208ENST00000438518 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
HDAC6-208ENST00000438518 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 A8MWV9 139 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GAGE7O76087 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 SNAPINO95295 136 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 GZMBP10144 247 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 BORCS7Q96B45 105 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 NAT8BQ9UHF3 227 aa13.08□□□□□ -0.32
HDAC6-208ENST00000438518 APOC3P02656 99 aa13.07□□□□□ -0.32
HDAC6-208ENST00000438518 ATP5G1P05496 136 aa13.07□□□□□ -0.32
HDAC6-208ENST00000438518 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
HDAC6-208ENST00000438518 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
HDAC6-208ENST00000438518 MUC4Q99102 2169 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 A0A087WWC5 75 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 TRAV4A0A0B4J268 109 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 SMIM27A0A1W2PRY6 76 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 HIGD1CA8MV81 97 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
HDAC6-208ENST00000438518 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 CLRN3Q8NCR9 226 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 OR10AG1Q8NH19 301 aa13.06□□□□□ -0.32
HDAC6-208ENST00000438518 TRAV10A0A0B4J240 114 aa13.05□□□□□ -0.32
HDAC6-208ENST00000438518 M0R381 172 aa13.05□□□□□ -0.32
HDAC6-208ENST00000438518 DMRTA1Q5VZB9 504 aa13.05□□□□□ -0.32
HDAC6-208ENST00000438518 Q6ZTC4 211 aa13.05□□□□□ -0.32
HDAC6-208ENST00000438518 IMMP2LQ96T52 175 aa13.05□□□□□ -0.32
HDAC6-208ENST00000438518 OR4C5Q8NGB2 326 aa13.04□□□□□ -0.32
HDAC6-208ENST00000438518 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
HDAC6-208ENST00000438518 C7orf77A4D0Y5 90 aa13.03□□□□□ -0.32
HDAC6-208ENST00000438518 RHODO00212 210 aa13.03□□□□□ -0.32
HDAC6-208ENST00000438518 RS1O15537 224 aa13.03□□□□□ -0.32
HDAC6-208ENST00000438518 TRGC1P0CF51 173 aa13.03□□□□□ -0.32
HDAC6-208ENST00000438518 ZFP2Q6ZN57 461 aa13.03□□□□□ -0.32
HDAC6-208ENST00000438518 A0A1B0GUT8 65 aa13.02□□□□□ -0.33
HDAC6-208ENST00000438518 SLAQ13239 276 aa13.02□□□□□ -0.33
HDAC6-208ENST00000438518 NUP35Q8NFH5 326 aa13.02□□□□□ -0.33
HDAC6-208ENST00000438518 PGLYRP4Q96LB8 373 aa13.02□□□□□ -0.33
HDAC6-208ENST00000438518 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 DEFB131BA0A096LNP1 70 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 A0A1B0GW15 77 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 NUPR2A6NF83 97 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 NTF3P20783 257 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
HDAC6-208ENST00000438518 SMIM17P0DL12 118 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 RIGQ13278 110 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 TWIST1Q15672 202 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 POM121L12Q8N7R1 296 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 MUC7Q8TAX7 377 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
HDAC6-208ENST00000438518 RPS10P5Q9NQ39 176 aa13□□□□□ -0.33
HDAC6-208ENST00000438518 TRAV9-1A0A075B6T8 112 aa12.99□□□□□ -0.33
HDAC6-208ENST00000438518 S100PP25815 95 aa12.99□□□□□ -0.33
HDAC6-208ENST00000438518 ATP5L2Q7Z4Y8 100 aa12.99□□□□□ -0.33
HDAC6-208ENST00000438518 TRGV4A0A0C4DH28 118 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms