RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RHOHQ15669 191 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 ZNF876PQ49A33 203 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 NTN5Q8WTR8 489 aaPredicted RBP5.25□□□□□ -1.57
VPS50-204ENST00000438395 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 TAAR5O14804 337 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 GNRH2O43555 120 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 CIDEAO60543 219 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 TYMSP04818 313 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 GATA1P15976 413 aaPredicted RBP5.24□□□□□ -1.57
VPS50-204ENST00000438395 CDC34P49427 236 aaPredicted RBP5.24□□□□□ -1.57
VPS50-204ENST00000438395 KRTAP10-1P60331 282 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 RAB2AP61019 212 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 LINC01556Q5JQF7 62 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 Q6ZSN1 163 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 C5orf17Q8NAS9 161 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 OR10G9Q8NGN4 311 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 OR10G7Q8NGN6 311 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 TM2D2Q9BX73 214 aa5.24□□□□□ -1.57
VPS50-204ENST00000438395 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-73A0A0B4J1V6 119 aa5.23□□□□□ -1.57
VPS50-204ENST00000438395 HMGB3O15347 200 aaKnown RBP5.23□□□□□ -1.57
VPS50-204ENST00000438395 EIF3GO75821 320 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS50-204ENST00000438395 ARL14EPLP0DKL9 152 aa5.23□□□□□ -1.57
VPS50-204ENST00000438395 S100A4P26447 101 aaKnown RBP5.23□□□□□ -1.57
VPS50-204ENST00000438395 XGP55808 180 aa5.23□□□□□ -1.57
VPS50-204ENST00000438395 GNG5P63218 68 aa5.23□□□□□ -1.57
VPS50-204ENST00000438395 TRBV6-4A0A1B0GX49 114 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 GCGP01275 180 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-30P01768 117 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 MBP02144 154 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-30-3P0DP02 117 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-30-5P0DP03 117 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 MGST1P10620 155 aaKnown RBP5.22□□□□□ -1.57
VPS50-204ENST00000438395 SMUG1Q53HV7 270 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 LELP1Q5T871 98 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 SLC25A29Q8N8R3 303 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 HSD17B11Q8NBQ5 300 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 SGK494Q96LW2 274 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 MARVELD1Q9BSK0 173 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 TMEM167BQ9NRX6 74 aa5.22□□□□□ -1.57
VPS50-204ENST00000438395 IBA57-AS1B1ANH7 110 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 RS1O15537 224 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 IFNA7P01567 189 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 TCRAP04437 139 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 GCHFRP30047 84 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 HAMPP81172 84 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 FLI1Q01543 452 aaPredicted RBP5.21□□□□□ -1.58
VPS50-204ENST00000438395 LAGE3Q14657 143 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 SAPCD1Q5SSQ6 148 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 CFAP126Q5VTH2 177 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 PRNTQ86SH4 94 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 CYB561D1Q8N8Q1 229 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 GTSF1LQ9H1H1 148 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 URGCP-MRPS24S4R325 110 aa5.21□□□□□ -1.58
VPS50-204ENST00000438395 A0A087WWC5 75 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 A8MWV9 139 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 CXorf1O96002 111 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 SEC11BP0C7V7 166 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 ASIPP42127 132 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 LGALSLQ3ZCW2 172 aaPredicted RBP5.2□□□□□ -1.58
VPS50-204ENST00000438395 ZNF506Q5JVG8 444 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 KCNIP4Q6PIL6 250 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 Q8N814 137 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 OR2G3Q8NGZ4 309 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 RAB24Q969Q5 203 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 RMI2Q96E14 147 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 TVP23CQ96ET8 276 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 ACTR3CQ9C0K3 210 aaPredicted RBP5.2□□□□□ -1.58
VPS50-204ENST00000438395 WFDC1Q9HC57 220 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 PSG8Q9UQ74 426 aa5.2□□□□□ -1.58
VPS50-204ENST00000438395 BORCS7-ASMTA0A0B4J1R7 106 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GGTLC3B5MD39 225 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 RHODO00212 210 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 STAG3L2P0CL84 134 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 STAG3L3P0CL85 134 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 FGF8P55075 233 aaPredicted RBP5.19□□□□□ -1.58
VPS50-204ENST00000438395 SERF2P84101 59 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GAGE1Q13065 139 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GAGE4Q13068 117 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GAGE5Q13069 117 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 TMEM75Q8N9X5 138 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 INO80EQ8NBZ0 244 aaPredicted RBP5.19□□□□□ -1.58
VPS50-204ENST00000438395 PTH2Q96A98 100 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 C9orf85Q96MD7 179 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 PSMG3Q9BT73 122 aaPredicted RBP5.19□□□□□ -1.58
VPS50-204ENST00000438395 EPDR1Q9UM22 224 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 COX11Q9Y6N1 276 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
VPS50-204ENST00000438395 LECT2O14960 151 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms