RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C16orf54Q6UWD8 224 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 TOMM7Q9P0U1 55 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 J3QQQ9 107 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 ZFAND6Q6FIF0 208 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 FOXI2Q6ZQN5 318 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 PPDPFLQ8WWR9 84 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 KLK9Q9UKQ9 250 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 PRRC2CQ9Y520 2896 aaKnown RBP5.16□□□□□ -1.58
CSDE1-205ENST00000438362 TRAV12-2A0A075B6T6 113 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 H3BUA1 57 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.58
CSDE1-205ENST00000438362 NPC2P61916 151 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 STHQ8IWL8 128 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 PRO1854Q9UHT4 67 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 ARHGAP32A7KAX9 2087 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 IGF2RP11717 2491 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 TRGV2A0A075B6R0 118 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 LY6LH3BQJ8 138 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 I3L3M4 83 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 TSPAN13O95857 204 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 AZU1P20160 251 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 TCF15Q12870 199 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 URB1-AS1Q96HZ7 61 aa5.15□□□□□ -1.58
CSDE1-205ENST00000438362 DSCAML1Q8TD84 2053 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 TRAV12-1A0A0B4J245 112 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 ODF3BA8MYP8 253 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 FSTL3O95633 263 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 DEFB131AP59861 70 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 MORN3Q6PF18 240 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-205ENST00000438362 C2orf82Q6UX34 121 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 KNCNA6PVL3 124 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 RBX1P62877 108 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 C5orf56Q8N8D9 126 aa5.15□□□□□ -1.59
CSDE1-205ENST00000438362 WFDC2Q14508 124 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 C10orf126Q8N4M7 172 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 TET2Q6N021 2002 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-205ENST00000438362 C2CD3Q4AC94 2353 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 ATRXP46100 2492 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 WNK1Q9H4A3 2382 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 ADORA2A-AS1P86434 159 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 SIRPDQ9H106 197 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 U3KQK5 164 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 FGF6P10767 208 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 GATA3P23771 443 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
CSDE1-205ENST00000438362 PHLDA1Q8WV24 401 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-205ENST00000438362 RPL36ALQ969Q0 106 aaKnown RBP5.14□□□□□ -1.59
CSDE1-205ENST00000438362 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 CHD9Q3L8U1 2897 aa5.14□□□□□ -1.59
CSDE1-205ENST00000438362 TRBV7-9A0A0J9YWB2 115 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 A0A1W2PRX2 142 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 KLHL30-AS1Q8NEE0 82 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 SORL1Q92673 2214 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 G3V4G9 280 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 RHODO00212 210 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 RHOHQ15669 191 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 TOMM6Q96B49 74 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 ADAMTS20P59510 1910 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 TNRC6BQ9UPQ9 1833 aaKnown RBP5.13□□□□□ -1.59
CSDE1-205ENST00000438362 TRGV1A0A0A0MS02 117 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 E9PLD3 99 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 TNFRSF13BO14836 293 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-205ENST00000438362 ZFP2Q6ZN57 461 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 RASL10AQ92737 203 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 CCDC140Q96MF4 163 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 BRCA2P51587 3418 aa5.13□□□□□ -1.59
CSDE1-205ENST00000438362 ADARB2-AS1A8MUL3 147 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 INSP01308 110 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 DEFB1P60022 68 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 SUMO4Q6EEV6 95 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 LINC01356Q8N9X3 169 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 BAALCQ8WXS3 180 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 AJUBAQ96IF1 538 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 MKI67P46013 3256 aaKnown RBP5.12□□□□□ -1.59
CSDE1-205ENST00000438362 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 BLCAPP62952 87 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 TMEM95Q3KNT9 176 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 TCTEX1D4Q5JR98 221 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 C11orf44Q8N8P7 122 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 NDUFA12Q9UI09 145 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 NACAE9PAV3 2078 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 PTPN13Q12923 2485 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 CEP295Q9C0D2 2601 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 IGKV2D-26A0A0A0MRZ7 120 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 EBI3Q14213 229 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 RNF185Q96GF1 192 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 SMAD5-AS1Q9Y6J3 95 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 IGHV4-61A0A0C4DH41 118 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 SLC25A20O43772 301 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 UNQ9165/PRO28630Q6UXU0 137 aa5.12□□□□□ -1.59
CSDE1-205ENST00000438362 TRAV8-3A0A0A6YYJ7 113 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 TRAV13-1A0A0B4J241 112 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 TRGV4A0A0C4DH28 118 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 LINC01548A6NM66 108 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 PRIMA1Q86XR5 153 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 GATD1Q8NB37 220 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 ZFAND3Q9H8U3 227 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms