RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 GNRH2O43555 120 aa19.14■□□□□ 0.65
CPNE1-216ENST00000437340 RNASE3P12724 160 aaKnown RBP19.14■□□□□ 0.65
CPNE1-216ENST00000437340 NXT2Q9NPJ8 142 aaKnown RBP19.14■□□□□ 0.65
CPNE1-216ENST00000437340 TIMM8BQ9Y5J9 83 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-216ENST00000437340 CDKN1BP46527 198 aa19.13■□□□□ 0.65
CPNE1-216ENST00000437340 DEFB125Q8N687 156 aa19.13■□□□□ 0.65
CPNE1-216ENST00000437340 DUX3Q96PT4 197 aa19.13■□□□□ 0.65
CPNE1-216ENST00000437340 ZNF747Q9BV97 191 aa19.13■□□□□ 0.65
CPNE1-216ENST00000437340 FN1P02751 2386 aaKnown RBP19.12■□□□□ 0.65
CPNE1-216ENST00000437340 A0A096LNJ9 63 aa19.12■□□□□ 0.65
CPNE1-216ENST00000437340 PRSS47A8MTI9 375 aa19.12■□□□□ 0.65
CPNE1-216ENST00000437340 MRAP2Q96G30 205 aa19.12■□□□□ 0.65
CPNE1-216ENST00000437340 F8P00451 2351 aa19.12■□□□□ 0.65
CPNE1-216ENST00000437340 M0R381 172 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 NXPH4O95158 308 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 GAS8-AS1O95177 125 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 SPATA45Q537H7 98 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 OR2K2Q8NGT1 345 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 MIEN1Q9BRT3 115 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 NF1P21359 2839 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 TRAV12-3A0A0B4J271 114 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 HBDP02042 147 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 FHL3Q13643 280 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 SPATA12Q7Z6I5 190 aa19.11■□□□□ 0.65
CPNE1-216ENST00000437340 LINC01006Q8NI28 216 aa19.1■□□□□ 0.65
CPNE1-216ENST00000437340 DYNLRB2Q8TF09 96 aa19.1■□□□□ 0.65
CPNE1-216ENST00000437340 DPH3P1Q9H4G8 78 aa19.1■□□□□ 0.65
CPNE1-216ENST00000437340 TRAV9-2A0A087WT02 112 aa19.09■□□□□ 0.65
CPNE1-216ENST00000437340 TMEM61Q8N0U2 210 aa19.09■□□□□ 0.65
CPNE1-216ENST00000437340 RAX2Q96IS3 184 aa19.09■□□□□ 0.65
CPNE1-216ENST00000437340 AMTNQ6UX39 209 aa19.09■□□□□ 0.65
CPNE1-216ENST00000437340 NRACQ8N912 160 aa19.09■□□□□ 0.65
CPNE1-216ENST00000437340 A8MTW9 85 aa19.08■□□□□ 0.64
CPNE1-216ENST00000437340 GATA1P15976 413 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-216ENST00000437340 DEFB114Q30KQ6 69 aa19.08■□□□□ 0.64
CPNE1-216ENST00000437340 ZNF705AQ6ZN79 300 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-216ENST00000437340 IGKV3-20P01619 116 aa19.07■□□□□ 0.64
CPNE1-216ENST00000437340 CD28P10747 220 aa19.07■□□□□ 0.64
CPNE1-216ENST00000437340 ATOH7Q8N100 152 aa19.07■□□□□ 0.64
CPNE1-216ENST00000437340 Q8N8P6 123 aa19.07■□□□□ 0.64
CPNE1-216ENST00000437340 AP1S3Q96PC3 154 aa19.07■□□□□ 0.64
CPNE1-216ENST00000437340 TSSC4Q9Y5U2 329 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-216ENST00000437340 OR4C46A6NHA9 309 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 CRLF1O75462 422 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 CD7P09564 240 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 HLA-DRB4P13762 266 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 DEFB131AP59861 70 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 SPINK13Q1W4C9 94 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 LINC01545Q5VT33 79 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 HLA-DRB4X5D2U9 266 aa19.06■□□□□ 0.64
CPNE1-216ENST00000437340 IGLV2-18A0A075B6J9 118 aa19.05■□□□□ 0.64
CPNE1-216ENST00000437340 CCL24O00175 119 aa19.05■□□□□ 0.64
CPNE1-216ENST00000437340 JMJD8Q96S16 334 aa19.05■□□□□ 0.64
CPNE1-216ENST00000437340 TRAV12-2A0A075B6T6 113 aa19.04■□□□□ 0.64
CPNE1-216ENST00000437340 TRAV25A0A0B4J276 109 aa19.04■□□□□ 0.64
CPNE1-216ENST00000437340 SPAG8Q99932 426 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-216ENST00000437340 IGHV1OR15-1A0A075B7D0 117 aa19.04■□□□□ 0.64
CPNE1-216ENST00000437340 TRAV26-2A0A0B4J265 109 aa19.04■□□□□ 0.64
CPNE1-216ENST00000437340 POM121L12Q8N7R1 296 aa19.04■□□□□ 0.64
CPNE1-216ENST00000437340 NDUFA7O95182 113 aa19.03■□□□□ 0.64
CPNE1-216ENST00000437340 LBHQ53QV2 105 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-216ENST00000437340 C14orf178Q8N769 122 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-216ENST00000437340 IGHV3-16A0A0C4DH30 117 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 H3BMM0 161 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 SPRY2O43597 315 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 IGLC3P0DOY3 106 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 FCER1GP30273 86 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 C11orf44Q8N8P7 122 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 C9orf85Q96MD7 179 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 CITED2Q99967 270 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-216ENST00000437340 UQCR10Q9UDW1 63 aa19.02■□□□□ 0.64
CPNE1-216ENST00000437340 CD300EQ496F6 205 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-216ENST00000437340 HIST2H2BDQ6DRA6 164 aa19.01■□□□□ 0.63
CPNE1-216ENST00000437340 MRPL52Q86TS9 123 aaKnown RBP19.01■□□□□ 0.63
CPNE1-216ENST00000437340 KNCNA6PVL3 124 aa19.01■□□□□ 0.63
CPNE1-216ENST00000437340 A0A1W2PRX2 142 aa19■□□□□ 0.63
CPNE1-216ENST00000437340 PPP1R17O96001 155 aa19■□□□□ 0.63
CPNE1-216ENST00000437340 MAJINQ3KP22 176 aa19■□□□□ 0.63
CPNE1-216ENST00000437340 C20orf78Q9BR46 151 aa19■□□□□ 0.63
CPNE1-216ENST00000437340 MAP6D1Q9H9H5 199 aa19■□□□□ 0.63
CPNE1-216ENST00000437340 IGLL1P15814 213 aa18.99■□□□□ 0.63
CPNE1-216ENST00000437340 KIF25-AS1Q9Y6Z4 181 aa18.99■□□□□ 0.63
CPNE1-216ENST00000437340 Q8N1Y9 231 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 IFI27L1Q96BM0 104 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 ZNF256Q9Y2P7 627 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-216ENST00000437340 SMIM17P0DL12 118 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 FXYD7P58549 80 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 RASL10AQ92737 203 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 ST20Q9HBF5 79 aa18.98■□□□□ 0.63
CPNE1-216ENST00000437340 TRGV11A0A075B6L2 103 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 H0Y8G0 127 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 LGALS9BQ3B8N2 356 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 LGALS9CQ6DKI2 356 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 SYT8Q8NBV8 401 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 SMIM2Q9BVW6 85 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 SORL1Q92673 2214 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 AGRNO00468 2067 aa18.97■□□□□ 0.63
CPNE1-216ENST00000437340 LINC00315P59091 139 aa18.96■□□□□ 0.63
CPNE1-216ENST00000437340 LAGE3Q14657 143 aa18.96■□□□□ 0.63
CPNE1-216ENST00000437340 MUC4Q99102 2169 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms