RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 PAX2Q02962 417 aa12.5□□□□□ -0.41
C9orf172-201ENST00000436881 TMEM86BQ8N661 226 aa12.5□□□□□ -0.41
C9orf172-201ENST00000436881 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
C9orf172-201ENST00000436881 I3L3M4 83 aa12.5□□□□□ -0.41
C9orf172-201ENST00000436881 HOXD3P31249 432 aaPredicted RBP12.5□□□□□ -0.41
C9orf172-201ENST00000436881 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
C9orf172-201ENST00000436881 FANCD2OSQ96PS1 177 aa12.5□□□□□ -0.41
C9orf172-201ENST00000436881 DEFB113Q30KQ7 82 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 AJUBAQ96IF1 538 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
C9orf172-201ENST00000436881 M0R2P5 195 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 FOXI2Q6ZQN5 318 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 CFHR4Q92496 578 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 ZNF48Q96MX3 618 aaPredicted RBP12.49□□□□□ -0.41
C9orf172-201ENST00000436881 SPXQ9BT56 116 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
C9orf172-201ENST00000436881 TRAV13-1A0A0B4J241 112 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 COX8AP10176 69 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 LINC00158P58513 81 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 F8VRH5 84 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 DEFB130BP0DP73 79 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 DEFB130AP0DP74 79 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 TMEM95Q3KNT9 176 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 HCFC1P51610 2035 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 IGKV1D-37A0A075B6S9 117 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 LINC00310P59036 64 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 C16orf54Q6UWD8 224 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 C1orf229Q6ZS94 237 aaPredicted RBP12.48□□□□□ -0.41
C9orf172-201ENST00000436881 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
C9orf172-201ENST00000436881 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
C9orf172-201ENST00000436881 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
C9orf172-201ENST00000436881 CRPP02741 224 aa12.47□□□□□ -0.41
C9orf172-201ENST00000436881 SCGB1A1P11684 91 aa12.47□□□□□ -0.41
C9orf172-201ENST00000436881 UNC80Q8N2C7 3258 aa12.46□□□□□ -0.41
C9orf172-201ENST00000436881 LMO4P61968 165 aa12.46□□□□□ -0.41
C9orf172-201ENST00000436881 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
C9orf172-201ENST00000436881 TRAV8-2A0A0B4J237 113 aa12.46□□□□□ -0.42
C9orf172-201ENST00000436881 GNRH2O43555 120 aa12.46□□□□□ -0.42
C9orf172-201ENST00000436881 IGHG2P01859 326 aa12.46□□□□□ -0.42
C9orf172-201ENST00000436881 CTRLP40313 264 aa12.46□□□□□ -0.42
C9orf172-201ENST00000436881 K7EMI3 77 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 HECTD1Q9ULT8 2610 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 CKS1BP61024 79 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 AZU1P20160 251 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 DEFB125Q8N687 156 aa12.45□□□□□ -0.42
C9orf172-201ENST00000436881 IGHV3-16A0A0C4DH30 117 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 C2orf70A6NJV1 201 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 PGPEP1Q9NXJ5 209 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 TP73-AS1Q9UF72 201 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE4Q13068 117 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE5Q13069 117 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 C6orf226Q5I0X4 101 aa12.44□□□□□ -0.42
C9orf172-201ENST00000436881 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
C9orf172-201ENST00000436881 GHRHP01286 108 aa12.43□□□□□ -0.42
C9orf172-201ENST00000436881 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
C9orf172-201ENST00000436881 K7EMT4 169 aa12.43□□□□□ -0.42
C9orf172-201ENST00000436881 NRGNQ92686 78 aa12.43□□□□□ -0.42
C9orf172-201ENST00000436881 ZNRF2Q8NHG8 242 aa12.42□□□□□ -0.42
C9orf172-201ENST00000436881 MSRB1Q9NZV6 116 aa12.42□□□□□ -0.42
C9orf172-201ENST00000436881 PRAC2D3DTV9 90 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 NPC2P61916 151 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 ATXN8Q156A1 80 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 PAX4O43316 350 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
C9orf172-201ENST00000436881 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 DEFB136Q30KP8 78 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
C9orf172-201ENST00000436881 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 TRBV25-1A0A075B6N4 114 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 CCL24O00175 119 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 SLC25A20O43772 301 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE7O76087 117 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.42
C9orf172-201ENST00000436881 GPHB5Q86YW7 130 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 PRORYQ9H606 182 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 TSSC4Q9Y5U2 329 aaPredicted RBP12.4□□□□□ -0.42
C9orf172-201ENST00000436881 TNRC6AQ8NDV7 1962 aaKnown RBP12.4□□□□□ -0.42
C9orf172-201ENST00000436881 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 C19orf71A6NCJ1 209 aa12.4□□□□□ -0.42
C9orf172-201ENST00000436881 K7EP13 123 aa12.39□□□□□ -0.43
C9orf172-201ENST00000436881 SS18Q15532 418 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1419.3 ms