RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RAB2AP61019 212 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 LINC01556Q5JQF7 62 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 Q6ZSN1 163 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 C5orf17Q8NAS9 161 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 OR10G9Q8NGN4 311 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 OR10G7Q8NGN6 311 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 TM2D2Q9BX73 214 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-73A0A0B4J1V6 119 aa5.23□□□□□ -1.57
VPS50-203ENST00000436177 HMGB3O15347 200 aaKnown RBP5.23□□□□□ -1.57
VPS50-203ENST00000436177 EIF3GO75821 320 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS50-203ENST00000436177 ARL14EPLP0DKL9 152 aa5.23□□□□□ -1.57
VPS50-203ENST00000436177 S100A4P26447 101 aaKnown RBP5.23□□□□□ -1.57
VPS50-203ENST00000436177 XGP55808 180 aa5.23□□□□□ -1.57
VPS50-203ENST00000436177 GNG5P63218 68 aa5.23□□□□□ -1.57
VPS50-203ENST00000436177 TRBV6-4A0A1B0GX49 114 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 GCGP01275 180 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-30P01768 117 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 MBP02144 154 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-30-3P0DP02 117 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-30-5P0DP03 117 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 MGST1P10620 155 aaKnown RBP5.22□□□□□ -1.57
VPS50-203ENST00000436177 SMUG1Q53HV7 270 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 LELP1Q5T871 98 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 SLC25A29Q8N8R3 303 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 HSD17B11Q8NBQ5 300 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 SGK494Q96LW2 274 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 MARVELD1Q9BSK0 173 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 TMEM167BQ9NRX6 74 aa5.22□□□□□ -1.57
VPS50-203ENST00000436177 IBA57-AS1B1ANH7 110 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 RS1O15537 224 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 IFNA7P01567 189 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 TCRAP04437 139 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 GCHFRP30047 84 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 HAMPP81172 84 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 FLI1Q01543 452 aaPredicted RBP5.21□□□□□ -1.58
VPS50-203ENST00000436177 LAGE3Q14657 143 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 SAPCD1Q5SSQ6 148 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 CFAP126Q5VTH2 177 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 PRNTQ86SH4 94 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 CYB561D1Q8N8Q1 229 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 GTSF1LQ9H1H1 148 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 URGCP-MRPS24S4R325 110 aa5.21□□□□□ -1.58
VPS50-203ENST00000436177 A0A087WWC5 75 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 A8MWV9 139 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 CXorf1O96002 111 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 SEC11BP0C7V7 166 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 ASIPP42127 132 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 SUMO1P63165 101 aaKnown RBP5.2□□□□□ -1.58
VPS50-203ENST00000436177 LGALSLQ3ZCW2 172 aaPredicted RBP5.2□□□□□ -1.58
VPS50-203ENST00000436177 ZNF506Q5JVG8 444 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 KCNIP4Q6PIL6 250 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 Q8N814 137 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 OR2G3Q8NGZ4 309 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 RAB24Q969Q5 203 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 RMI2Q96E14 147 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 TVP23CQ96ET8 276 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 ACTR3CQ9C0K3 210 aaPredicted RBP5.2□□□□□ -1.58
VPS50-203ENST00000436177 WFDC1Q9HC57 220 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 PSG8Q9UQ74 426 aa5.2□□□□□ -1.58
VPS50-203ENST00000436177 BORCS7-ASMTA0A0B4J1R7 106 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GGTLC3B5MD39 225 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 RHODO00212 210 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
VPS50-203ENST00000436177 STAG3L2P0CL84 134 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 STAG3L3P0CL85 134 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 FGF8P55075 233 aaPredicted RBP5.19□□□□□ -1.58
VPS50-203ENST00000436177 SERF2P84101 59 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GAGE1Q13065 139 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GAGE4Q13068 117 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GAGE5Q13069 117 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 TMEM75Q8N9X5 138 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 INO80EQ8NBZ0 244 aaPredicted RBP5.19□□□□□ -1.58
VPS50-203ENST00000436177 PTH2Q96A98 100 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 C9orf85Q96MD7 179 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 PSMG3Q9BT73 122 aaPredicted RBP5.19□□□□□ -1.58
VPS50-203ENST00000436177 EPDR1Q9UM22 224 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 COX11Q9Y6N1 276 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
VPS50-203ENST00000436177 LECT2O14960 151 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 C1QBP02746 253 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 ATP6V0CP27449 155 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 ZNF80P51504 273 aaPredicted RBP5.18□□□□□ -1.58
VPS50-203ENST00000436177 IFITM3Q01628 133 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 DPPA3Q6W0C5 159 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 ZFP2Q6ZN57 461 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 OR2T35Q8NGX2 323 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 MED28Q9H204 178 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 PARLQ9H300 379 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 C11orf21Q9P2W6 132 aa5.18□□□□□ -1.58
VPS50-203ENST00000436177 FAT1Q14517 4588 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms