RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
HMGB3P24-201ENST00000433260 FMC1Q96HJ9 113 aa4.03□□□□□ -1.76
HMGB3P24-201ENST00000433260 VSIG2Q96IQ7 327 aa4.03□□□□□ -1.76
HMGB3P24-201ENST00000433260 ZNF479Q96JC4 524 aa4.03□□□□□ -1.76
HMGB3P24-201ENST00000433260 HHLA3Q9XRX5 114 aa4.03□□□□□ -1.76
HMGB3P24-201ENST00000433260 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 A0A096LPF7 62 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 IGHV3-73A0A0B4J1V6 119 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 RAB19A4D1S5 217 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 B4DEV8 164 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 S100A4P26447 101 aaKnown RBP4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 CCL18P55774 89 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 SSTP61278 116 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 FHL2Q14192 279 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 ESRGQ1W209 222 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 ZNF876PQ49A33 203 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 PRR27Q6MZM9 219 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 BAGE2Q86Y30 109 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 C15orf53Q8NAA6 179 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 RASL10AQ92737 203 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 MED9Q9NWA0 146 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 ZFP30Q9Y2G7 519 aa4.02□□□□□ -1.77
HMGB3P24-201ENST00000433260 TRAV1-1A0A0B4J248 108 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 KRBOX1C9JBD0 128 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 M0R2P5 195 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 SH2D1AO60880 128 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 LTAP01374 205 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 IFNA1P01562 189 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 S100A9P06702 114 aaKnown RBP4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 S100A6P06703 90 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 ARMS2P0C7Q2 107 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 MGST1P10620 155 aaKnown RBP4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 MALP21145 153 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 ASIPP42127 132 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 RPL35P42766 123 aaKnown RBP4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 CRYBA4P53673 196 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 RNF212Q495C1 297 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 PCNPQ8WW12 178 aaKnown RBP4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 DERL1Q9BUN8 251 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 MANBALQ9NQG1 85 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 LINC00588Q9Y4M8 146 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 MUC4Q99102 2169 aa4.01□□□□□ -1.77
HMGB3P24-201ENST00000433260 MUC21A0A0G2JKD1 596 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 TRBV6-1A0A0K0K1D8 114 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 LOC100131303A0A0U1RQF7 123 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 MUC21A0A140T8X8 626 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 RBFOX3A6NFN3 312 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 H3BVH4 76 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 BLOC1S1P78537 153 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 RPL19P84098 196 aaKnown RBP4□□□□□ -1.77
HMGB3P24-201ENST00000433260 MEF2BQ02080 365 aaPredicted RBP4□□□□□ -1.77
HMGB3P24-201ENST00000433260 ZNF506Q5JVG8 444 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 FAM162BQ5T6X4 162 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 C9orf85Q96MD7 179 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 C18orf15Q96N68 181 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 TCEAL7Q9BRU2 100 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 JPT2Q9H910 190 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 FAM30AQ9NZY2 134 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 PRO0255Q9UI72 69 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 VAX2Q9UIW0 290 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
HMGB3P24-201ENST00000433260 STARD9Q9P2P6 4700 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 TRAV4A0A0B4J268 109 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 H3BNG1 76 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 M0R381 172 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 RS1O15537 224 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 BCL2P10415 239 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 CEBPGP53567 150 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 SLAQ13239 276 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 MRPL23Q16540 153 aaKnown RBP3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 CFAP126Q5VTH2 177 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 Q6ZSN1 163 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 ZNF575Q86XF7 245 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 DAZAP1Q96EP5 407 aaKnown RBP3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 TXNDC17Q9BRA2 123 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 MLST8Q9BVC4 326 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 SAMD10Q9BYL1 202 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 EIF5A2Q9GZV4 153 aaKnown RBP3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 Q9H8V8 135 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 CHTOPQ9Y3Y2 248 aaKnown RBP3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 PHLDA3Q9Y5J5 127 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 ICOSQ9Y6W8 199 aa3.99□□□□□ -1.77
HMGB3P24-201ENST00000433260 A0A087WWL8 130 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 K7EQD1 137 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 PDE6DO43924 150 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 IGLV2-8P01709 118 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 GZMBP10144 247 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 SRIP30626 198 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 GNG4P50150 75 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 FAM74A4Q5TZK3 123 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 NEGR1Q7Z3B1 354 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 SLC25A29Q8N8R3 303 aa3.98□□□□□ -1.77
HMGB3P24-201ENST00000433260 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms