RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CACNG7P62955 275 aa13.26□□□□□ -0.29
HMGN1-206ENST00000431390 TMEM136Q6ZRR5 245 aa13.26□□□□□ -0.29
HMGN1-206ENST00000431390 CSNK1G2-AS1Q8NCQ2 148 aa13.26□□□□□ -0.29
HMGN1-206ENST00000431390 TMEM208Q9BTX3 173 aa13.26□□□□□ -0.29
HMGN1-206ENST00000431390 DNAH3Q8TD57 4116 aa13.26□□□□□ -0.29
HMGN1-206ENST00000431390 IGHV4-4A0A075B6R2 117 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 HLA-DQA1P01909 254 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 CAMPP49913 170 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 RYR3Q15413 4870 aa13.25□□□□□ -0.29
HMGN1-206ENST00000431390 IGHV4-30-4P0DP06 118 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 NTF3P20783 257 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 APOC4P55056 127 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 OR10AG1Q8NH19 301 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 C9orf85Q96MD7 179 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 TRAPPC1Q9Y5R8 145 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 MUC21A0A0G2JKD1 596 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 MUC21A0A140T8X8 626 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 A8MZ25 164 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 TRGC2P03986 189 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 RAB4BP61018 213 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 TWIST1Q15672 202 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 SPANXN1Q5VSR9 72 aa13.24□□□□□ -0.29
HMGN1-206ENST00000431390 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
HMGN1-206ENST00000431390 ZNF705AQ6ZN79 300 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-206ENST00000431390 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
HMGN1-206ENST00000431390 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
HMGN1-206ENST00000431390 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-206ENST00000431390 NXPH4O95158 308 aa13.22□□□□□ -0.29
HMGN1-206ENST00000431390 HTN1P15515 57 aa13.22□□□□□ -0.29
HMGN1-206ENST00000431390 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
HMGN1-206ENST00000431390 FABP9Q0Z7S8 132 aa13.22□□□□□ -0.29
HMGN1-206ENST00000431390 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
HMGN1-206ENST00000431390 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
HMGN1-206ENST00000431390 PHOX2AO14813 284 aa13.21□□□□□ -0.29
HMGN1-206ENST00000431390 FRZBQ92765 325 aa13.21□□□□□ -0.29
HMGN1-206ENST00000431390 UBE2CO00762 179 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 SSTP61278 116 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 ZFP82Q8N141 532 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 MUC4Q99102 2169 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 C11orf72Q8NBR9 251 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 TMEM263Q8WUH6 116 aaKnown RBP13.2□□□□□ -0.3
HMGN1-206ENST00000431390 TMEM191AQ9H0A3 160 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
HMGN1-206ENST00000431390 M0R381 172 aa13.19□□□□□ -0.3
HMGN1-206ENST00000431390 APCSP02743 223 aa13.19□□□□□ -0.3
HMGN1-206ENST00000431390 RAB5BP61020 215 aa13.19□□□□□ -0.3
HMGN1-206ENST00000431390 SPXQ9BT56 116 aa13.19□□□□□ -0.3
HMGN1-206ENST00000431390 PRM2P04554 102 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 TRGC1P0CF51 173 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 SLAQ13239 276 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
HMGN1-206ENST00000431390 PTH2Q96A98 100 aa13.18□□□□□ -0.3
HMGN1-206ENST00000431390 AZU1P20160 251 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 DMRTA1Q5VZB9 504 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 RCHY1Q96PM5 261 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 GSN-AS1Q9NRJ2 163 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
HMGN1-206ENST00000431390 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
HMGN1-206ENST00000431390 K7EIL1 84 aa13.16□□□□□ -0.3
HMGN1-206ENST00000431390 SPRY2O43597 315 aa13.16□□□□□ -0.3
HMGN1-206ENST00000431390 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
HMGN1-206ENST00000431390 M0R2P5 195 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 FAM104BQ5XKR9 115 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 IL17DQ8TAD2 202 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 Q6ZWC4 215 aa13.15□□□□□ -0.3
HMGN1-206ENST00000431390 HIST1H2BKO60814 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BJP06899 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 EVI2AP22794 236 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BOP23527 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BBP33778 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BDP58876 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BCP62807 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST2H2BEQ16778 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 ZNF876PQ49A33 203 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BHQ93079 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BNQ99877 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 HIST1H2BMQ99879 126 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 NDUFAF3Q9BU61 184 aa13.14□□□□□ -0.31
HMGN1-206ENST00000431390 DEFB135Q30KP9 77 aa13.13□□□□□ -0.31
HMGN1-206ENST00000431390 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
HMGN1-206ENST00000431390 DPH3P1Q9H4G8 78 aa13.13□□□□□ -0.31
HMGN1-206ENST00000431390 X6R8D5 127 aa13.13□□□□□ -0.31
HMGN1-206ENST00000431390 KIAA1644Q3SXP7 199 aa13.12□□□□□ -0.31
HMGN1-206ENST00000431390 DNAH9Q9NYC9 4486 aa13.12□□□□□ -0.31
HMGN1-206ENST00000431390 PLAC8L1A1L4L8 177 aa13.11□□□□□ -0.31
HMGN1-206ENST00000431390 RAB4AP20338 218 aa13.11□□□□□ -0.31
HMGN1-206ENST00000431390 DAZ2Q13117 558 aaKnown RBP13.11□□□□□ -0.31
HMGN1-206ENST00000431390 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
HMGN1-206ENST00000431390 RNF183Q96D59 192 aa13.11□□□□□ -0.31
HMGN1-206ENST00000431390 RNF185Q96GF1 192 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms