RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 C16orf95Q9H693 158 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 A0A0J9YX75 114 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 MRPL51Q4U2R6 128 aaKnown RBP12.44□□□□□ -0.42
USHBP1-203ENST00000431146 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 INAFM1C9JVW0 142 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 K7ERU9 68 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 M0R2Z0 102 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 GNRH2O43555 120 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 APRG1Q8IVJ8 170 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 DYNLRB2Q8TF09 96 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
USHBP1-203ENST00000431146 KLLNB2CW77 178 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 CCL24O00175 119 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 NCR2O95944 276 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 SCGB1A1P11684 91 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 EBLN2Q6P2I7 272 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
USHBP1-203ENST00000431146 TRAV12-3A0A0B4J271 114 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 KRTDAPP60985 99 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 TMEM191AQ9H0A3 160 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 GAS8-AS1O95177 125 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 EVI2AP22794 236 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 TEX43Q6ZNM6 134 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
USHBP1-203ENST00000431146 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
USHBP1-203ENST00000431146 FN1P02751 2386 aaKnown RBP12.4□□□□□ -0.42
USHBP1-203ENST00000431146 LOC389332A0A1B0GUA5 103 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 S100A4P26447 101 aaKnown RBP12.4□□□□□ -0.42
USHBP1-203ENST00000431146 DEFB131AP59861 70 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 FHL3Q13643 280 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 BATFQ16520 125 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-203ENST00000431146 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 PRELID3AQ96N28 172 aa12.4□□□□□ -0.42
USHBP1-203ENST00000431146 FLNBO75369 2602 aaKnown RBP12.4□□□□□ -0.42
USHBP1-203ENST00000431146 SNAI2O43623 268 aa12.4□□□□□ -0.43
USHBP1-203ENST00000431146 OR5AL1P0C617 328 aa12.4□□□□□ -0.43
USHBP1-203ENST00000431146 DEFB114Q30KQ6 69 aa12.4□□□□□ -0.43
USHBP1-203ENST00000431146 CKS2P33552 79 aa12.39□□□□□ -0.43
USHBP1-203ENST00000431146 FXYD7P58549 80 aa12.39□□□□□ -0.43
USHBP1-203ENST00000431146 ORMDL3Q8N138 153 aa12.39□□□□□ -0.43
USHBP1-203ENST00000431146 A0A1B0GV72 72 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 M0R381 172 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 ASIPP42127 132 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 U3KQK5 164 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 MUC4Q99102 2169 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 C7orf71A4D174 169 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 IFI27P40305 119 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-203ENST00000431146 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
USHBP1-203ENST00000431146 NPYP01303 97 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 LEPP41159 167 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 NSUN5P1Q3KNT7 163 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 CHCHD1Q96BP2 118 aaKnown RBP12.37□□□□□ -0.43
USHBP1-203ENST00000431146 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
USHBP1-203ENST00000431146 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
USHBP1-203ENST00000431146 FAM159AQ6UWV7 190 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 PRSS3P2Q8NHM4 247 aa12.37□□□□□ -0.43
USHBP1-203ENST00000431146 PROK1P58294 105 aa12.36□□□□□ -0.43
USHBP1-203ENST00000431146 STPG4Q8N801 248 aa12.36□□□□□ -0.43
USHBP1-203ENST00000431146 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
USHBP1-203ENST00000431146 SIGLEC8Q9NYZ4 499 aa12.36□□□□□ -0.43
USHBP1-203ENST00000431146 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
USHBP1-203ENST00000431146 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 NDUFA7O95182 113 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 AMTNQ6UX39 209 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 IGHV4-4A0A075B6R2 117 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 DUSP14O95147 198 aaKnown RBP12.35□□□□□ -0.43
USHBP1-203ENST00000431146 CD7P09564 240 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 CACNG7P62955 275 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 TDRG1Q3Y452 100 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 Q8N976 141 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
USHBP1-203ENST00000431146 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
USHBP1-203ENST00000431146 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
USHBP1-203ENST00000431146 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
USHBP1-203ENST00000431146 KRTAP10-3P60369 221 aa12.34□□□□□ -0.43
USHBP1-203ENST00000431146 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-203ENST00000431146 JMJD1CQ15652 2540 aa12.33□□□□□ -0.43
USHBP1-203ENST00000431146 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
USHBP1-203ENST00000431146 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
USHBP1-203ENST00000431146 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
USHBP1-203ENST00000431146 SCRT2Q9NQ03 307 aa12.33□□□□□ -0.44
USHBP1-203ENST00000431146 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
USHBP1-203ENST00000431146 H3BMM0 161 aa12.32□□□□□ -0.44
USHBP1-203ENST00000431146 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
USHBP1-203ENST00000431146 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
USHBP1-203ENST00000431146 TSPOP30536 169 aa12.32□□□□□ -0.44
USHBP1-203ENST00000431146 C14orf178Q8N769 122 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms