RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
PRNP-203ENST00000430350 HLA-DMBP28068 263 aa11.29□□□□□ -0.6
PRNP-203ENST00000430350 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
PRNP-203ENST00000430350 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
PRNP-203ENST00000430350 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 PRB4P10163 310 aaPredicted RBP11.28□□□□□ -0.6
PRNP-203ENST00000430350 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 VGLL1Q99990 258 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 SMR3AQ99954 134 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
PRNP-203ENST00000430350 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
PRNP-203ENST00000430350 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
PRNP-203ENST00000430350 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
PRNP-203ENST00000430350 F8W1H4 67 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
PRNP-203ENST00000430350 SRD5A1P18405 259 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 FCER1GP30273 86 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.61
PRNP-203ENST00000430350 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 LINC01619G3V211 115 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 J3QR89 54 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 SH2D1AO60880 128 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 ATP5LO75964 103 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 BMI1P35226 326 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 ODF1Q14990 250 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 RNF182Q8N6D2 247 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
PRNP-203ENST00000430350 MAP1LC3AQ9H492 121 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
PRNP-203ENST00000430350 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
PRNP-203ENST00000430350 CKS2P33552 79 aa11.26□□□□□ -0.61
PRNP-203ENST00000430350 E9PLD3 99 aa11.26□□□□□ -0.61
PRNP-203ENST00000430350 NPYP01303 97 aa11.26□□□□□ -0.61
PRNP-203ENST00000430350 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
PRNP-203ENST00000430350 ZNF418Q8TF45 676 aaPredicted RBP11.26□□□□□ -0.61
PRNP-203ENST00000430350 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
PRNP-203ENST00000430350 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 A0A087WW49 117 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 LY6G6DO95868 133 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 NMUP48645 174 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 CHAC1Q9BUX1 264 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 SIGMAR1Q99720 223 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
PRNP-203ENST00000430350 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 LGALS9O00182 355 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
PRNP-203ENST00000430350 RAB37Q96AX2 223 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 ASCL2Q99929 193 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
PRNP-203ENST00000430350 FXYD2P54710 66 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 HILS1P60008 231 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 RPL11P62913 178 aaKnown RBP11.24□□□□□ -0.61
PRNP-203ENST00000430350 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 CEND1Q8N111 149 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 PRR25Q96S07 402 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
PRNP-203ENST00000430350 IGKCP01834 107 aa11.23□□□□□ -0.61
PRNP-203ENST00000430350 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
PRNP-203ENST00000430350 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
PRNP-203ENST00000430350 SOCS3O14543 225 aa11.23□□□□□ -0.61
PRNP-203ENST00000430350 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
PRNP-203ENST00000430350 EDN2P20800 178 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 DPM2O94777 84 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 TWIST1Q15672 202 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 Q8TAT8 98 aa11.22□□□□□ -0.61
PRNP-203ENST00000430350 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
PRNP-203ENST00000430350 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
PRNP-203ENST00000430350 GCSHP23434 173 aa11.21□□□□□ -0.61
PRNP-203ENST00000430350 ERCC8Q13216 396 aa11.21□□□□□ -0.61
PRNP-203ENST00000430350 NAA38Q9BRA0 125 aaKnown RBP11.21□□□□□ -0.61
PRNP-203ENST00000430350 C16orf95Q9H693 158 aa11.21□□□□□ -0.61
PRNP-203ENST00000430350 A0A1B0GWB2 263 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 KHDC1LQ5JSQ8 128 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 Q8N8P6 123 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 A0A1B0GV72 72 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
PRNP-203ENST00000430350 IGKV3-7A0A075B6H7 116 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 IGLL5B9A064 214 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
PRNP-203ENST00000430350 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 TMEM78Q5T7P6 136 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 OR11H1Q8NG94 326 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 MTORP42345 2549 aa11.19□□□□□ -0.62
PRNP-203ENST00000430350 ANK3Q12955 4377 aaKnown RBP11.19□□□□□ -0.62
PRNP-203ENST00000430350 AZU1P20160 251 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms