RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 F6UB75 175 aa8.67□□□□□ -1.02
LINC01238-203ENST00000429456 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
LINC01238-203ENST00000429456 LY6EQ16553 131 aa8.67□□□□□ -1.02
LINC01238-203ENST00000429456 KLK15Q9H2R5 256 aa8.67□□□□□ -1.02
LINC01238-203ENST00000429456 ZFHX3Q15911 3703 aa8.67□□□□□ -1.02
LINC01238-203ENST00000429456 LINC01619G3V211 115 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 GNRH2O43555 120 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 POM121L12Q8N7R1 296 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 AGRNO00468 2067 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 ASH1LQ9NR48 2969 aaKnown RBP8.66□□□□□ -1.02
LINC01238-203ENST00000429456 SPTBN4Q9H254 2564 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 E9PLD3 99 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 MGPP08493 103 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 RPL11P62913 178 aaKnown RBP8.66□□□□□ -1.02
LINC01238-203ENST00000429456 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 RHPN1-AS1Q9BWJ2 59 aa8.66□□□□□ -1.02
LINC01238-203ENST00000429456 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
LINC01238-203ENST00000429456 IGLL5B9A064 214 aa8.65□□□□□ -1.02
LINC01238-203ENST00000429456 H3BUX3 64 aa8.65□□□□□ -1.02
LINC01238-203ENST00000429456 NXPH4O95158 308 aa8.65□□□□□ -1.02
LINC01238-203ENST00000429456 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
LINC01238-203ENST00000429456 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.03
LINC01238-203ENST00000429456 PPP1R17O96001 155 aa8.65□□□□□ -1.03
LINC01238-203ENST00000429456 C12orf74Q32Q52 190 aa8.65□□□□□ -1.03
LINC01238-203ENST00000429456 MUC4Q99102 2169 aa8.65□□□□□ -1.03
LINC01238-203ENST00000429456 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 IGLV1-40P01703 118 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 LINC00315P59091 139 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 BLCAPP62952 87 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 Q6ZS46 218 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 OR11H1Q8NG94 326 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 C10orf105Q8TEF2 133 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 HIST1H4GQ99525 98 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
LINC01238-203ENST00000429456 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 KLLNB2CW77 178 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 GNLYP22749 145 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 CRYBA4P53673 196 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 LCNL1Q6ZST4 164 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 DAZ1Q9NQZ3 744 aaKnown RBP8.63□□□□□ -1.03
LINC01238-203ENST00000429456 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
LINC01238-203ENST00000429456 RPL32P62910 135 aaKnown RBP8.63□□□□□ -1.03
LINC01238-203ENST00000429456 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 A0A087WW49 117 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 RIPPLY3P57055 190 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 CFHR3Q02985 330 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 FOXI2Q6ZQN5 318 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 PRORYQ9H606 182 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 A0A1B0GV72 72 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 A4D1N5 150 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 K7EMT4 169 aa8.62□□□□□ -1.03
LINC01238-203ENST00000429456 LGALS1P09382 135 aaKnown RBP8.62□□□□□ -1.03
LINC01238-203ENST00000429456 SRD5A1P18405 259 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 EDN2P20800 178 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
LINC01238-203ENST00000429456 CRYGDP07320 174 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 ID1P41134 155 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
LINC01238-203ENST00000429456 DCANP1Q8TF63 244 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 CCL19Q99731 98 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
LINC01238-203ENST00000429456 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
LINC01238-203ENST00000429456 TRAV26-1A0A087WT03 109 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 TSHBP01222 138 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 JPT2Q9H910 190 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 CYSLTR1Q9Y271 337 aa8.6□□□□□ -1.03
LINC01238-203ENST00000429456 IGHV4-30-2A0A087WSY4 118 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 MSMBP08118 114 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 COX6B1P14854 86 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 SAMD13Q5VXD3 122 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 SUMO4Q6EEV6 95 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 F8W1H4 67 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
LINC01238-203ENST00000429456 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 TP53TG1Q9Y2A0 90 aa8.59□□□□□ -1.03
LINC01238-203ENST00000429456 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 VCYO14598 125 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 CD7P09564 240 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 ATP5J2P56134 94 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 CITED1Q99966 193 aa8.58□□□□□ -1.04
LINC01238-203ENST00000429456 A0A087WWL8 130 aa8.57□□□□□ -1.04
LINC01238-203ENST00000429456 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
LINC01238-203ENST00000429456 LGALS9O00182 355 aa8.57□□□□□ -1.04
LINC01238-203ENST00000429456 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
LINC01238-203ENST00000429456 AVPP01185 164 aa8.57□□□□□ -1.04
LINC01238-203ENST00000429456 HERV-K104P63124 156 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms