RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 GAGE7O76087 117 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 GAGE4Q13068 117 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 FHL3Q13643 280 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 CDSNQ15517 529 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 NFE4Q86UQ8 179 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 FOXC2Q99958 501 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 UBTD1Q9HAC8 227 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 DCHS2Q6V1P9 2916 aa6.76□□□□□ -1.33
CDH13-202ENST00000428848 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 TRGV3P03979 118 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 PPIFP30405 207 aaKnown RBP6.75□□□□□ -1.33
CDH13-202ENST00000428848 MORN3Q6PF18 240 aaPredicted RBP6.75□□□□□ -1.33
CDH13-202ENST00000428848 TEN1Q86WV5 123 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 MRPL53Q96EL3 112 aaKnown RBP6.75□□□□□ -1.33
CDH13-202ENST00000428848 MYO18BQ8IUG5 2567 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 IGHV3OR16-8A0A075B7F1 116 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 M0QXV9 152 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 TGFAP01135 160 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 C15orf32Q32M92 178 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 TEX29Q8N6K0 151 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 ITLN2Q8WWU7 325 aaPredicted RBP6.75□□□□□ -1.33
CDH13-202ENST00000428848 AJUBAQ96IF1 538 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 U3KQE9 123 aa6.75□□□□□ -1.33
CDH13-202ENST00000428848 CSMD1Q96PZ7 3565 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 A0A087WX48 190 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 CENPVL3A0A0U1RRI6 287 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 HOXA3O43365 443 aaPredicted RBP6.74□□□□□ -1.33
CDH13-202ENST00000428848 SRD5A1P18405 259 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 PLNP26678 52 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 MAPKAPK5-AS1Q8N8E1 139 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 NRGNQ92686 78 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 CCDC140Q96MF4 163 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 SIRPDQ9H106 197 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 TRAV40A0A0B4J280 105 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 K7EMI3 77 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 ZNF688P0C7X2 276 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 UBE2E1P51965 193 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 LAGE3Q14657 143 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 SBSPONQ8IVN8 264 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
CDH13-202ENST00000428848 MRPL35Q9NZE8 188 aaKnown RBP6.74□□□□□ -1.33
CDH13-202ENST00000428848 PRSS29PA6NIE9 313 aa6.73□□□□□ -1.33
CDH13-202ENST00000428848 ZFP36P26651 326 aaKnown RBP6.73□□□□□ -1.33
CDH13-202ENST00000428848 CARD19Q96LW7 228 aa6.73□□□□□ -1.33
CDH13-202ENST00000428848 NBASA2RRP1 2371 aa6.73□□□□□ -1.33
CDH13-202ENST00000428848 HECTD1Q9ULT8 2610 aa6.73□□□□□ -1.33
CDH13-202ENST00000428848 ATP6V0E1O15342 81 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 UBE2D3P61077 147 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 UBE2D2P62837 147 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 MYOZ3Q8TDC0 251 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 TMEM160Q9NX00 188 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
CDH13-202ENST00000428848 COL12A1Q99715 3063 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 MED13LQ71F56 2210 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 TRAV12-1A0A0B4J245 112 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 RHODO00212 210 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 Q6ZQT7 251 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 LRBAP50851 2863 aa6.72□□□□□ -1.33
CDH13-202ENST00000428848 TRBV20-1A0A075B6N2 111 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 TRAV26-2A0A0B4J265 109 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 IGHV3-66A0A0C4DH42 116 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.33
CDH13-202ENST00000428848 GNLYP22749 145 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 ASIPP42127 132 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 UBE2D1P51668 147 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 ECSCRQ19T08 205 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 CLEC19AQ6UXS0 136 aa6.71□□□□□ -1.33
CDH13-202ENST00000428848 CYSRT1A8MQ03 144 aa6.71□□□□□ -1.34
CDH13-202ENST00000428848 A8MWV9 139 aa6.71□□□□□ -1.34
CDH13-202ENST00000428848 Q6Q795 121 aa6.71□□□□□ -1.34
CDH13-202ENST00000428848 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.34
CDH13-202ENST00000428848 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
CDH13-202ENST00000428848 FLNCQ14315 2725 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 TRBV7-1A0A0A6YYK4 115 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 LINC01548A6NM66 108 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 F8VRH5 84 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 PSMB2P49721 201 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 PRR9Q5T870 116 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 EEF1AKMT3Q96AZ1 226 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 METTL26Q96S19 204 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 PIMREGQ9BSJ6 248 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 SMIM2Q9BVW6 85 aa6.7□□□□□ -1.34
CDH13-202ENST00000428848 HRNRQ86YZ3 2850 aaPredicted RBP6.7□□□□□ -1.34
CDH13-202ENST00000428848 IGHV3OR16-13A0A075B7E8 117 aa6.69□□□□□ -1.34
CDH13-202ENST00000428848 IGHV3-74A0A0B4J1X5 117 aa6.69□□□□□ -1.34
CDH13-202ENST00000428848 G3V318 75 aa6.69□□□□□ -1.34
CDH13-202ENST00000428848 NDUFV3P56181 108 aaKnown RBP6.69□□□□□ -1.34
CDH13-202ENST00000428848 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
CDH13-202ENST00000428848 H7C1H1 209 aa6.69□□□□□ -1.34
CDH13-202ENST00000428848 LGALS1P09382 135 aaKnown RBP6.69□□□□□ -1.34
CDH13-202ENST00000428848 SLC25A16P16260 332 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms