RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 GFRA4Q9GZZ7 299 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 IL36BQ9NZH7 164 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 TRGV1A0A0A0MS02 117 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 SMIM27A0A1W2PRY6 76 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 M0R381 172 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 SPINK4O60575 86 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 OR5AL1P0C617 328 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 IGLC6P0CF74 106 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 RNASE3P12724 160 aaKnown RBP5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 LYZL1Q6UWQ5 148 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 ZFP82Q8N141 532 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 SPXQ9BT56 116 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 MRPL16Q9NX20 251 aaKnown RBP5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 NAT8BQ9UHF3 227 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 URGCP-MRPS24S4R325 110 aa5.69□□□□□ -1.5
HMGA1P4-201ENST00000428643 PLAC8L1A1L4L8 177 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 F2Z2F3 143 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 M0R2P5 195 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 SNAI2O43623 268 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 FAM3BP58499 235 aaPredicted RBP5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 CACNG7P62955 275 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 DAZ2Q13117 558 aaKnown RBP5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 DNLZQ5SXM8 178 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 TMEM88Q6PEY1 159 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 ZNF575Q86XF7 245 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 CBLN2Q8IUK8 224 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 NUP35Q8NFH5 326 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 IL17DQ8TAD2 202 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 IMMP2LQ96T52 175 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 SCRT2Q9NQ03 307 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
HMGA1P4-201ENST00000428643 TRGV2A0A075B6R0 118 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A0J9YWU9 116 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 TEX48A0A1B0GUV7 120 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 SCO1O75880 301 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 GAGE7O76087 117 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 NXPH4O95158 308 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 NHLRC4P0CG21 123 aaPredicted RBP5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 DEFB130BP0DP73 79 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 DEFB130AP0DP74 79 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 RIGQ13278 110 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 TWIST1Q15672 202 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 ZNF876PQ49A33 203 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 FAM222AQ5U5X8 452 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 MRPL54Q6P161 138 aaKnown RBP5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 Q6ZTI0 123 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 SMCO4Q9NRQ5 59 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
HMGA1P4-201ENST00000428643 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 CAMPP49913 170 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 FOXA3P55318 350 aaPredicted RBP5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 HBBP68871 147 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 BTF3L4Q96K17 158 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 DKK2Q9UBU2 259 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 CELA1Q9UNI1 258 aa5.66□□□□□ -1.5
HMGA1P4-201ENST00000428643 IGHV4-4A0A075B6R2 117 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 TRAV9-1A0A075B6T8 112 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A087WWL8 130 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 TGIF2-C20orf24A0A0A6YYL0 155 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 IGHV3-53P01767 116 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 S100A8P05109 93 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 TRGC1P0CF51 173 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 SMIM17P0DL12 118 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 NTF3P20783 257 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 RAB4BP61018 213 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 DAD1P61803 113 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 FAM74A4Q5TZK3 123 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 SMIM15Q7Z3B0 74 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 ATP5L2Q7Z4Y8 100 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 MSRB1Q9NZV6 116 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 U3KQK5 164 aa5.65□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A1B0GW15 77 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 A0A1B0GXF2 115 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 A8MWV9 139 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 MGPP08493 103 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 ELOBQ15370 118 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 PIK3CD-AS1Q5SR53 167 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 WDR73Q6P4I2 378 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 C14orf178Q8N769 122 aaPredicted RBP5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 OR4C5Q8NGB2 326 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 C11orf45Q8TAV5 145 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms