RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3D-202ENST00000427494 OR1N2Q8NGR9 330 aa10.44□□□□□ -0.74
APOBEC3D-202ENST00000427494 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
APOBEC3D-202ENST00000427494 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3D-202ENST00000427494 IGLV2-18A0A075B6J9 118 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 FCER1GP30273 86 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 KRTAP1-1Q07627 177 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 HIST2H2BDQ6DRA6 164 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 YAE1D1Q9NRH1 226 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 PEMTQ9UBM1 199 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 TRAV12-2A0A075B6T6 113 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 MGPP08493 103 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 CD7P09564 240 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 TSPOP30536 169 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 AP1S3Q96PC3 154 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 ESM1Q9NQ30 184 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
APOBEC3D-202ENST00000427494 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 CD5LO43866 347 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 CDKN1BP46527 198 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 ZNF469Q96JG9 3925 aaPredicted RBP10.42□□□□□ -0.74
APOBEC3D-202ENST00000427494 NXPH4O95158 308 aa10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 FOXC2Q99958 501 aa10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 DLX4Q92988 240 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3D-202ENST00000427494 TCAPO15273 167 aa10.4□□□□□ -0.74
APOBEC3D-202ENST00000427494 LAGE3Q14657 143 aa10.4□□□□□ -0.74
APOBEC3D-202ENST00000427494 DYNLRB2Q8TF09 96 aa10.4□□□□□ -0.74
APOBEC3D-202ENST00000427494 RASL10AQ92737 203 aa10.4□□□□□ -0.74
APOBEC3D-202ENST00000427494 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
APOBEC3D-202ENST00000427494 PDZD2O15018 2839 aa10.4□□□□□ -0.75
APOBEC3D-202ENST00000427494 MUC4Q99102 2169 aa10.4□□□□□ -0.75
APOBEC3D-202ENST00000427494 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 DEFB131AP59861 70 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 SMIM2Q9BVW6 85 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 AGRNO00468 2067 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 SMIM17P0DL12 118 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 FLNAP21333 2647 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-202ENST00000427494 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
APOBEC3D-202ENST00000427494 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
APOBEC3D-202ENST00000427494 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
APOBEC3D-202ENST00000427494 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
APOBEC3D-202ENST00000427494 TLN2Q9Y4G6 2542 aa10.38□□□□□ -0.75
APOBEC3D-202ENST00000427494 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 SUMO2P61956 95 aaKnown RBP10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 Q8N1Y9 231 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 RAX2Q96IS3 184 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 JPT2Q9H910 190 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
APOBEC3D-202ENST00000427494 NUDT3O95989 172 aa10.36□□□□□ -0.75
APOBEC3D-202ENST00000427494 CD28P10747 220 aa10.36□□□□□ -0.75
APOBEC3D-202ENST00000427494 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
APOBEC3D-202ENST00000427494 CCDC168Q8NDH2 2452 aa10.36□□□□□ -0.75
APOBEC3D-202ENST00000427494 ATP5LO75964 103 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 PRSS1P07477 247 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 HLA-DRB4P13762 266 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 ZNF124Q15973 351 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 HLA-DRB4X5D2U9 266 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 SONP18583 2426 aaKnown RBP10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 A0A087WWL8 130 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 PPP1R17O96001 155 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 LINC00315P59091 139 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 SYT8Q8NBV8 401 aa10.35□□□□□ -0.75
APOBEC3D-202ENST00000427494 H3BMM0 161 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 COX8AP10176 69 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 ODF1Q14990 250 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 STPG4Q8N801 248 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 A8MTW9 85 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
APOBEC3D-202ENST00000427494 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 F5H697 171 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms