RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 USF3Q68DE3 2245 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 KLF2Q9Y5W3 355 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 DOCK10Q96BY6 2186 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 TIRAPP58753 221 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 ZNF503Q96F45 646 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 ESM1Q9NQ30 184 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 ZNF407Q9C0G0 2248 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 SPART-AS1P0CW21 52 aa13.97□□□□□ -0.17
ARHGEF28-203ENST00000426542 K7EIM0 57 aa13.96□□□□□ -0.17
ARHGEF28-203ENST00000426542 HEATR5AQ86XA9 2040 aa13.96□□□□□ -0.17
ARHGEF28-203ENST00000426542 NLRC5Q86WI3 1866 aa13.96□□□□□ -0.17
ARHGEF28-203ENST00000426542 ACACAQ13085 2346 aa13.96□□□□□ -0.18
ARHGEF28-203ENST00000426542 IGLV11-55A0A075B6I3 123 aa13.96□□□□□ -0.18
ARHGEF28-203ENST00000426542 ATP5G1P05496 136 aa13.96□□□□□ -0.18
ARHGEF28-203ENST00000426542 Q8NFD4 153 aa13.96□□□□□ -0.18
ARHGEF28-203ENST00000426542 RNF152Q8N8N0 203 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 CACNA1BQ00975 2339 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 CCL18P55774 89 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 IL15RAQ13261 267 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 IGHV4-28A0A0C4DH34 117 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 COX7A2LO14548 114 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 IGHV4OR15-8A0A075B7B6 117 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 A0A087WW49 117 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 TEX48A0A1B0GUV7 120 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 C16orf54Q6UWD8 224 aa13.95□□□□□ -0.18
ARHGEF28-203ENST00000426542 DAZ2Q13117 558 aaKnown RBP13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 NRGNQ92686 78 aa13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 PKIGQ9Y2B9 76 aa13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 ZFP2Q6ZN57 461 aa13.94□□□□□ -0.18
ARHGEF28-203ENST00000426542 CCL25O15444 150 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 CTSGP08311 255 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 HIST2H2BCQ6DN03 193 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 DOCK9Q9BZ29 2069 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 F8W735 103 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 MSRB1Q9NZV6 116 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 IGFL2Q6UWQ7 119 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 C5orf56Q8N8D9 126 aa13.93□□□□□ -0.18
ARHGEF28-203ENST00000426542 COX7B2Q8TF08 81 aa13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 FUSP35637 526 aaKnown RBP eCLIP13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 PKDREJQ9NTG1 2253 aa13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 ROS1P08922 2347 aa13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 SND1-IT1Q9HBX3 110 aa13.92□□□□□ -0.18
ARHGEF28-203ENST00000426542 MUSTN1Q8IVN3 82 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 KRTAP27-1Q3LI81 207 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 CACNA1GO43497 2377 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 RBM3P98179 157 aaKnown RBP13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 Q8N9W7 124 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 C10orf105Q8TEF2 133 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 PATE2Q6UY27 113 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 LYPD6BQ8NI32 183 aa13.91□□□□□ -0.18
ARHGEF28-203ENST00000426542 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 NCR3O14931 201 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 SH2D6Q7Z4S9 175 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 ABCA4P78363 2273 aa13.9□□□□□ -0.18
ARHGEF28-203ENST00000426542 Q8N1Y9 231 aa13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 MRPL36Q9P0J6 103 aaKnown RBP13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 Q6ZVH6 145 aa13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 NCOR1O75376 2440 aa13.89□□□□□ -0.19
ARHGEF28-203ENST00000426542 LINC00173Q6ZV60 143 aa13.88□□□□□ -0.19
ARHGEF28-203ENST00000426542 C2orf70A6NJV1 201 aa13.88□□□□□ -0.19
ARHGEF28-203ENST00000426542 PRAC2D3DTV9 90 aa13.88□□□□□ -0.19
ARHGEF28-203ENST00000426542 HHLA3Q9XRX5 114 aa13.88□□□□□ -0.19
ARHGEF28-203ENST00000426542 ABCA1O95477 2261 aa13.88□□□□□ -0.19
ARHGEF28-203ENST00000426542 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
ARHGEF28-203ENST00000426542 IGHG2P01859 326 aa13.87□□□□□ -0.19
ARHGEF28-203ENST00000426542 RPL39P62891 51 aaKnown RBP13.87□□□□□ -0.19
ARHGEF28-203ENST00000426542 DAND5Q8N907 189 aa13.87□□□□□ -0.19
ARHGEF28-203ENST00000426542 CDPF1Q6NVV7 123 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 DEFB4AO15263 64 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 ANAPC1Q9H1A4 1944 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 IGLL5B9A064 214 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 LINC01545Q5VT33 79 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 TMEM258P61165 79 aa13.86□□□□□ -0.19
ARHGEF28-203ENST00000426542 CLPSL1A2RUU4 121 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 CITED1Q99966 193 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 A4D1N5 150 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 ZFP36P26651 326 aaKnown RBP13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 TRBV7-3A0A075B6L6 115 aa13.85□□□□□ -0.19
ARHGEF28-203ENST00000426542 H0YGX0 51 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 UBE2AP49459 152 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 C5orf47Q569G3 176 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 OPRPNQ99935 248 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 CHKB-CPT1BH3BT56 60 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 ACYP1P07311 99 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 C9orf47Q6ZRZ4 202 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 VSIG2Q96IQ7 327 aa13.84□□□□□ -0.19
ARHGEF28-203ENST00000426542 TEX22C9J3V5 150 aa13.83□□□□□ -0.19
ARHGEF28-203ENST00000426542 NDUFA1O15239 70 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms